Đajić, Nevena

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orcid::0000-0003-4420-9781
  • Đajić, Nevena (20)
  • Maljurić, Nevena (14)
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Author's Bibliography

QSRR Approach: Application to Retention Mechanism in Liquid Chromatography

Krmar, Jovana; Svrkota, Bojana; Đajić, Nevena; Stojanović, Jevrem; Protić, Ana; Otašević, Biljana

(IntechOpen, 2023)

TY  - CHAP
AU  - Krmar, Jovana
AU  - Svrkota, Bojana
AU  - Đajić, Nevena
AU  - Stojanović, Jevrem
AU  - Protić, Ana
AU  - Otašević, Biljana
PY  - 2023
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4907
AB  - One-factor-at-a-time experimentation was used for a long time as gold-standard
optimization for liquid chromatographic (LC) method development. This approach
has two downsides as it requires a needlessly great number of experimental runs and it
is unable to identify possible factor interactions. At the end of the last century,
however, this problem could be solved with the introduction of new chemometric
strategies. This chapter aims at presenting quantitative structure–retention relationship
(QSRR) models with structuring possibilities, from the point of feature selection
through various machine learning algorithms that can be used in model building, for
internal and external validation of the proposed models. The presented strategies of
QSRR model can be a good starting point for analysts to use and adopt them as a good
practice for their applications. QSRR models can be used in predicting the retention
behavior of compounds, to point out the molecular features governing the retention,
and consequently to gain insight into the retention mechanisms. In terms of these
applications, special attention was drawn to modified chromatographic systems,
characterized by mobile or stationary phase modifications. Although chromatographic
methods are applied in a wide variety of fields, the greatest attention has been devoted
to the analysis of pharmaceuticals.
PB  - IntechOpen
T2  - Novel Aspects of Gas Chromatography and Chemometrics
T1  - QSRR Approach: Application to Retention Mechanism in Liquid Chromatography
SP  - 113
EP  - 141
DO  - 10.5772/intechopen.106245
ER  - 
@inbook{
author = "Krmar, Jovana and Svrkota, Bojana and Đajić, Nevena and Stojanović, Jevrem and Protić, Ana and Otašević, Biljana",
year = "2023",
abstract = "One-factor-at-a-time experimentation was used for a long time as gold-standard
optimization for liquid chromatographic (LC) method development. This approach
has two downsides as it requires a needlessly great number of experimental runs and it
is unable to identify possible factor interactions. At the end of the last century,
however, this problem could be solved with the introduction of new chemometric
strategies. This chapter aims at presenting quantitative structure–retention relationship
(QSRR) models with structuring possibilities, from the point of feature selection
through various machine learning algorithms that can be used in model building, for
internal and external validation of the proposed models. The presented strategies of
QSRR model can be a good starting point for analysts to use and adopt them as a good
practice for their applications. QSRR models can be used in predicting the retention
behavior of compounds, to point out the molecular features governing the retention,
and consequently to gain insight into the retention mechanisms. In terms of these
applications, special attention was drawn to modified chromatographic systems,
characterized by mobile or stationary phase modifications. Although chromatographic
methods are applied in a wide variety of fields, the greatest attention has been devoted
to the analysis of pharmaceuticals.",
publisher = "IntechOpen",
journal = "Novel Aspects of Gas Chromatography and Chemometrics",
booktitle = "QSRR Approach: Application to Retention Mechanism in Liquid Chromatography",
pages = "113-141",
doi = "10.5772/intechopen.106245"
}
Krmar, J., Svrkota, B., Đajić, N., Stojanović, J., Protić, A.,& Otašević, B.. (2023). QSRR Approach: Application to Retention Mechanism in Liquid Chromatography. in Novel Aspects of Gas Chromatography and Chemometrics
IntechOpen., 113-141.
https://doi.org/10.5772/intechopen.106245
Krmar J, Svrkota B, Đajić N, Stojanović J, Protić A, Otašević B. QSRR Approach: Application to Retention Mechanism in Liquid Chromatography. in Novel Aspects of Gas Chromatography and Chemometrics. 2023;:113-141.
doi:10.5772/intechopen.106245 .
Krmar, Jovana, Svrkota, Bojana, Đajić, Nevena, Stojanović, Jevrem, Protić, Ana, Otašević, Biljana, "QSRR Approach: Application to Retention Mechanism in Liquid Chromatography" in Novel Aspects of Gas Chromatography and Chemometrics (2023):113-141,
https://doi.org/10.5772/intechopen.106245 . .
2

Advanced QSRR Modeling in β-CD-Modifed RP-HPLC System

Đajić, Nevena; Protić, Ana

(Marcel Dekker Inc., 2023)

TY  - CHAP
AU  - Đajić, Nevena
AU  - Protić, Ana
PY  - 2023
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4906
PB  - Marcel Dekker Inc.
T2  - Advances in Chromatography
T1  - Advanced QSRR Modeling in β-CD-Modifed RP-HPLC System
VL  - 59
SP  - 99
EP  - 144
DO  - 10.1201/9781003330080-3
ER  - 
@inbook{
author = "Đajić, Nevena and Protić, Ana",
year = "2023",
publisher = "Marcel Dekker Inc.",
journal = "Advances in Chromatography",
booktitle = "Advanced QSRR Modeling in β-CD-Modifed RP-HPLC System",
volume = "59",
pages = "99-144",
doi = "10.1201/9781003330080-3"
}
Đajić, N.,& Protić, A.. (2023). Advanced QSRR Modeling in β-CD-Modifed RP-HPLC System. in Advances in Chromatography
Marcel Dekker Inc.., 59, 99-144.
https://doi.org/10.1201/9781003330080-3
Đajić N, Protić A. Advanced QSRR Modeling in β-CD-Modifed RP-HPLC System. in Advances in Chromatography. 2023;59:99-144.
doi:10.1201/9781003330080-3 .
Đajić, Nevena, Protić, Ana, "Advanced QSRR Modeling in β-CD-Modifed RP-HPLC System" in Advances in Chromatography, 59 (2023):99-144,
https://doi.org/10.1201/9781003330080-3 . .
1

Robust optimization of gradient RP HPLC method for simultaneous determination of ivabradine and its eleven related substances by AQbD approach

Tomić, Jovana; Đajić, Nevena; Agbaba, Danica; Otašević, Biljana; Malenović, Anđelija; Protić, Ana

(Akademiai Kiado ZRt., 2022)

TY  - JOUR
AU  - Tomić, Jovana
AU  - Đajić, Nevena
AU  - Agbaba, Danica
AU  - Otašević, Biljana
AU  - Malenović, Anđelija
AU  - Protić, Ana
PY  - 2022
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4331
AB  - This paper is aimed at developing a gradient elution reversed-phase high-performance liquid chromatography (RP-HPLC) method for the separation of a complex mixture composed of ivabradine and its eleven impurities, in a reasonable timeframe. In order to obtain a robust and reliable HPLC method for separation of this mixture, Analytical Quality by Design (AQbD) was applied. This approach demonstrated to be useful in development of a long lasting life cycle methods. Four chromatographic variables were defined as key method parameters (KMPs) and optimized towards the analytical target profile (ATP). Designated KMPs were initial and final amount of acetonitrile in the mobile phase, pH value of the aqueous phase and gradient time, while resolutions of critical peak pairs were denoted as critical method attributes (CMAs). Relationships between KMPs and CMAs were obtained with the aid of Design of Experiments (DoEs) methodology among which Box-Behnken design (BBD) was employed to gain valid mathematical models. Obtained mathematical equations were used to construct the Design Space (DS) and select reliable optimal separation conditions. They included 11% (v/v) and 34% (v/v) of initial and final amount of acetonitrile, respectively, as well as 45 min of gradient elution time and 20 mM ammonium acetate as aqueous mobile phase with pH set to 7.35. The possibility to separate the diastereoisomers of impurity X was also evaluated. It was demonstrated that this separation could not be achieved in gradient elution mode within the defined variable domains and in a reasonable time span. The developed method was validated according to ICH Q2 (R1) guideline and met all the required criteria.
PB  - Akademiai Kiado ZRt.
T2  - Acta Chromatographica
T1  - Robust optimization of gradient RP HPLC method for simultaneous determination of ivabradine and its eleven related substances by AQbD approach
VL  - 34
IS  - 1
SP  - 1
EP  - 11
DO  - 10.1556/1326.2021.00885
ER  - 
@article{
author = "Tomić, Jovana and Đajić, Nevena and Agbaba, Danica and Otašević, Biljana and Malenović, Anđelija and Protić, Ana",
year = "2022",
abstract = "This paper is aimed at developing a gradient elution reversed-phase high-performance liquid chromatography (RP-HPLC) method for the separation of a complex mixture composed of ivabradine and its eleven impurities, in a reasonable timeframe. In order to obtain a robust and reliable HPLC method for separation of this mixture, Analytical Quality by Design (AQbD) was applied. This approach demonstrated to be useful in development of a long lasting life cycle methods. Four chromatographic variables were defined as key method parameters (KMPs) and optimized towards the analytical target profile (ATP). Designated KMPs were initial and final amount of acetonitrile in the mobile phase, pH value of the aqueous phase and gradient time, while resolutions of critical peak pairs were denoted as critical method attributes (CMAs). Relationships between KMPs and CMAs were obtained with the aid of Design of Experiments (DoEs) methodology among which Box-Behnken design (BBD) was employed to gain valid mathematical models. Obtained mathematical equations were used to construct the Design Space (DS) and select reliable optimal separation conditions. They included 11% (v/v) and 34% (v/v) of initial and final amount of acetonitrile, respectively, as well as 45 min of gradient elution time and 20 mM ammonium acetate as aqueous mobile phase with pH set to 7.35. The possibility to separate the diastereoisomers of impurity X was also evaluated. It was demonstrated that this separation could not be achieved in gradient elution mode within the defined variable domains and in a reasonable time span. The developed method was validated according to ICH Q2 (R1) guideline and met all the required criteria.",
publisher = "Akademiai Kiado ZRt.",
journal = "Acta Chromatographica",
title = "Robust optimization of gradient RP HPLC method for simultaneous determination of ivabradine and its eleven related substances by AQbD approach",
volume = "34",
number = "1",
pages = "1-11",
doi = "10.1556/1326.2021.00885"
}
Tomić, J., Đajić, N., Agbaba, D., Otašević, B., Malenović, A.,& Protić, A.. (2022). Robust optimization of gradient RP HPLC method for simultaneous determination of ivabradine and its eleven related substances by AQbD approach. in Acta Chromatographica
Akademiai Kiado ZRt.., 34(1), 1-11.
https://doi.org/10.1556/1326.2021.00885
Tomić J, Đajić N, Agbaba D, Otašević B, Malenović A, Protić A. Robust optimization of gradient RP HPLC method for simultaneous determination of ivabradine and its eleven related substances by AQbD approach. in Acta Chromatographica. 2022;34(1):1-11.
doi:10.1556/1326.2021.00885 .
Tomić, Jovana, Đajić, Nevena, Agbaba, Danica, Otašević, Biljana, Malenović, Anđelija, Protić, Ana, "Robust optimization of gradient RP HPLC method for simultaneous determination of ivabradine and its eleven related substances by AQbD approach" in Acta Chromatographica, 34, no. 1 (2022):1-11,
https://doi.org/10.1556/1326.2021.00885 . .
4
3

Modified aqueous mobile phases: A way to improve retention behavior of active pharmaceutical compounds and their impurities in liquid chromatography

Đajić, Nevena; Krmar, Jovana; Rmandić, Milena; Rašević, Marija; Otašević, Biljana; Zečević, Mira; Malenović, Anđelija; Protić, Ana

(Elsevier B.V., 2022)

TY  - JOUR
AU  - Đajić, Nevena
AU  - Krmar, Jovana
AU  - Rmandić, Milena
AU  - Rašević, Marija
AU  - Otašević, Biljana
AU  - Zečević, Mira
AU  - Malenović, Anđelija
AU  - Protić, Ana
PY  - 2022
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4995
AB  - Most commonly used analytical technique for determination of active pharmaceutical ingredients and their impurities in quality control throughout all phases of drug research, development and manufacture is definitely reversed-phase high performance liquid chromatography (RP-HPLC). However, pharmaceutical industry professionals are often faced with various challenges in RP mode, which cannot be resolved with common variations in the composition of the mobile phase. These challenges often occur when analyzing compounds that contain basic ionizable groups, possess large differences in polarities and require consumption of high amounts of toxic organic solvents. Among available strategies for addressing the aforementioned issues, the most convenient one includes RP-HPLC mobile phase modifications by an addition of the proper chemical compounds. In that respect, RP-HPLC method can be easily adapted to the needs of the analysis without time-consuming and expensive equipment procurement. In this review the chaotropic chromatography, micellar liquid chromatography, and cyclodextrin modified RP-HPLC systems are presented and discussed in details. Special attention is devoted to the theoretical background, the possibility of retention modeling and applications in various fields of pharmacy, as well as their prospective in further research.
PB  - Elsevier B.V.
T2  - Journal of Chromatography Open
T1  - Modified aqueous mobile phases: A way to improve retention behavior of active pharmaceutical compounds and their impurities in liquid chromatography
VL  - 2
DO  - 10.1016/j.jcoa.2021.100023
ER  - 
@article{
author = "Đajić, Nevena and Krmar, Jovana and Rmandić, Milena and Rašević, Marija and Otašević, Biljana and Zečević, Mira and Malenović, Anđelija and Protić, Ana",
year = "2022",
abstract = "Most commonly used analytical technique for determination of active pharmaceutical ingredients and their impurities in quality control throughout all phases of drug research, development and manufacture is definitely reversed-phase high performance liquid chromatography (RP-HPLC). However, pharmaceutical industry professionals are often faced with various challenges in RP mode, which cannot be resolved with common variations in the composition of the mobile phase. These challenges often occur when analyzing compounds that contain basic ionizable groups, possess large differences in polarities and require consumption of high amounts of toxic organic solvents. Among available strategies for addressing the aforementioned issues, the most convenient one includes RP-HPLC mobile phase modifications by an addition of the proper chemical compounds. In that respect, RP-HPLC method can be easily adapted to the needs of the analysis without time-consuming and expensive equipment procurement. In this review the chaotropic chromatography, micellar liquid chromatography, and cyclodextrin modified RP-HPLC systems are presented and discussed in details. Special attention is devoted to the theoretical background, the possibility of retention modeling and applications in various fields of pharmacy, as well as their prospective in further research.",
publisher = "Elsevier B.V.",
journal = "Journal of Chromatography Open",
title = "Modified aqueous mobile phases: A way to improve retention behavior of active pharmaceutical compounds and their impurities in liquid chromatography",
volume = "2",
doi = "10.1016/j.jcoa.2021.100023"
}
Đajić, N., Krmar, J., Rmandić, M., Rašević, M., Otašević, B., Zečević, M., Malenović, A.,& Protić, A.. (2022). Modified aqueous mobile phases: A way to improve retention behavior of active pharmaceutical compounds and their impurities in liquid chromatography. in Journal of Chromatography Open
Elsevier B.V.., 2.
https://doi.org/10.1016/j.jcoa.2021.100023
Đajić N, Krmar J, Rmandić M, Rašević M, Otašević B, Zečević M, Malenović A, Protić A. Modified aqueous mobile phases: A way to improve retention behavior of active pharmaceutical compounds and their impurities in liquid chromatography. in Journal of Chromatography Open. 2022;2.
doi:10.1016/j.jcoa.2021.100023 .
Đajić, Nevena, Krmar, Jovana, Rmandić, Milena, Rašević, Marija, Otašević, Biljana, Zečević, Mira, Malenović, Anđelija, Protić, Ana, "Modified aqueous mobile phases: A way to improve retention behavior of active pharmaceutical compounds and their impurities in liquid chromatography" in Journal of Chromatography Open, 2 (2022),
https://doi.org/10.1016/j.jcoa.2021.100023 . .
8
8

Chemometrically supported optimization of RP/WCX-HPLC method

Svrkota, Bojana; Krmar, Jovana; Đajić, Nevena; Protić, Ana; Otašević, Biljana

(Ankara University Faculty of Pharmacy, 2022)

TY  - CONF
AU  - Svrkota, Bojana
AU  - Krmar, Jovana
AU  - Đajić, Nevena
AU  - Protić, Ana
AU  - Otašević, Biljana
PY  - 2022
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4692
AB  - Introduction: Active pharmaceutical ingredients
(APIs) are often used in salt form, which is why the
inclusion of weak cation exchange (WCX), in
addition to reverse-phased (RP) hydrophobic
interactions, could improve APIs’ separation (1).
Due to the limited knowledge about the RP/WCX
bimodal system, the aim was to elucidate the
experimental factors’ influence on the retention of
diverse ionized APIs, and provide efficient method
optimization.
Materials and Methods: Acidic (ibuprofen (IB),
aceclofenac (AC)) and basic (escitalopram (ES),
aripiprazole (AR), atomoxetine (AT)) analytes were
tested. Chromatography experiments were
performed on Thermo Acclaim Mixed Mode WCX-
1 (5 μm, 3x10 mm) column. Mobile phase
consisted of ACN (30-50% (v/v)) and acetic buffer
(pH 3.8 - 5.6; ionic strength (I) 20-40 mM).
Temperature (T) was varied in range 30–38 °C.
Variations of these factors were conducted
according to Full Factorial Design 24. Optimization
phase was executed by using face-centered
Central Composite Design (Design-Expert 7.0.0).
Results: Screening results showed that %ACN
had the greatest impact on analytes’ retention
factors (k), so increasing in %ACN caused a
decrease in k. T had the same effect, but much less
pronounced. Changes in mobile phase pH affected
k, with the opposite effect on anionic and cationic species. This is attributed to greater ionization of
stationary phases’ carboxylic groups at higher pH.
As consequence, repulsive interactions with
anionic and attractive interactions with the cationic
analytes, are enhanced, vice versa (2). Ionic
strength had much more influence on cationic
analytes than on anionic ones. Due to all the
above, all of four factors were included during
optimization phase. Optimization goals were set so
that k values were in range 1–10 (k(AR)<10,
k(AC)>10, k(IB) in range) and selectivity of critical
peak pair α(AT/ES)>1.3. All derived mathematical
models were statistically estimated (R2, adj. R2,
pred. R2>0.95). Set of optimal conditions which is
47% (v/v) ACN, acetic buffer (40 mМ, pH 3.8) and
temperature 30 °C was determined using
Derringer’s desirability function.
Conclusions: Experimental parameters with
significant influence on retention in bimodal
RP/WCX system were evaluated, and upon that
method was successfully optimized.
PB  - Ankara University Faculty of Pharmacy
C3  - 13th International Symposium on Pharmaceutical Sciences (ISOPS), June 22-25, 2021, Ankara, Turkey
T1  - Chemometrically supported optimization of RP/WCX-HPLC method
SP  - 228
EP  - 229
UR  - https://hdl.handle.net/21.15107/rcub_farfar_4692
ER  - 
@conference{
author = "Svrkota, Bojana and Krmar, Jovana and Đajić, Nevena and Protić, Ana and Otašević, Biljana",
year = "2022",
abstract = "Introduction: Active pharmaceutical ingredients
(APIs) are often used in salt form, which is why the
inclusion of weak cation exchange (WCX), in
addition to reverse-phased (RP) hydrophobic
interactions, could improve APIs’ separation (1).
Due to the limited knowledge about the RP/WCX
bimodal system, the aim was to elucidate the
experimental factors’ influence on the retention of
diverse ionized APIs, and provide efficient method
optimization.
Materials and Methods: Acidic (ibuprofen (IB),
aceclofenac (AC)) and basic (escitalopram (ES),
aripiprazole (AR), atomoxetine (AT)) analytes were
tested. Chromatography experiments were
performed on Thermo Acclaim Mixed Mode WCX-
1 (5 μm, 3x10 mm) column. Mobile phase
consisted of ACN (30-50% (v/v)) and acetic buffer
(pH 3.8 - 5.6; ionic strength (I) 20-40 mM).
Temperature (T) was varied in range 30–38 °C.
Variations of these factors were conducted
according to Full Factorial Design 24. Optimization
phase was executed by using face-centered
Central Composite Design (Design-Expert 7.0.0).
Results: Screening results showed that %ACN
had the greatest impact on analytes’ retention
factors (k), so increasing in %ACN caused a
decrease in k. T had the same effect, but much less
pronounced. Changes in mobile phase pH affected
k, with the opposite effect on anionic and cationic species. This is attributed to greater ionization of
stationary phases’ carboxylic groups at higher pH.
As consequence, repulsive interactions with
anionic and attractive interactions with the cationic
analytes, are enhanced, vice versa (2). Ionic
strength had much more influence on cationic
analytes than on anionic ones. Due to all the
above, all of four factors were included during
optimization phase. Optimization goals were set so
that k values were in range 1–10 (k(AR)<10,
k(AC)>10, k(IB) in range) and selectivity of critical
peak pair α(AT/ES)>1.3. All derived mathematical
models were statistically estimated (R2, adj. R2,
pred. R2>0.95). Set of optimal conditions which is
47% (v/v) ACN, acetic buffer (40 mМ, pH 3.8) and
temperature 30 °C was determined using
Derringer’s desirability function.
Conclusions: Experimental parameters with
significant influence on retention in bimodal
RP/WCX system were evaluated, and upon that
method was successfully optimized.",
publisher = "Ankara University Faculty of Pharmacy",
journal = "13th International Symposium on Pharmaceutical Sciences (ISOPS), June 22-25, 2021, Ankara, Turkey",
title = "Chemometrically supported optimization of RP/WCX-HPLC method",
pages = "228-229",
url = "https://hdl.handle.net/21.15107/rcub_farfar_4692"
}
Svrkota, B., Krmar, J., Đajić, N., Protić, A.,& Otašević, B.. (2022). Chemometrically supported optimization of RP/WCX-HPLC method. in 13th International Symposium on Pharmaceutical Sciences (ISOPS), June 22-25, 2021, Ankara, Turkey
Ankara University Faculty of Pharmacy., 228-229.
https://hdl.handle.net/21.15107/rcub_farfar_4692
Svrkota B, Krmar J, Đajić N, Protić A, Otašević B. Chemometrically supported optimization of RP/WCX-HPLC method. in 13th International Symposium on Pharmaceutical Sciences (ISOPS), June 22-25, 2021, Ankara, Turkey. 2022;:228-229.
https://hdl.handle.net/21.15107/rcub_farfar_4692 .
Svrkota, Bojana, Krmar, Jovana, Đajić, Nevena, Protić, Ana, Otašević, Biljana, "Chemometrically supported optimization of RP/WCX-HPLC method" in 13th International Symposium on Pharmaceutical Sciences (ISOPS), June 22-25, 2021, Ankara, Turkey (2022):228-229,
https://hdl.handle.net/21.15107/rcub_farfar_4692 .

QSRR-ANN modelling in β-CD-modified RP-HPLC

Đajić, Nevena; Krmar, Jovana; Otašević, Biljana; Malenović, Anđelija; Protić, Ana

(Ankara University Faculty of Pharmacy, 2021)

TY  - CONF
AU  - Đajić, Nevena
AU  - Krmar, Jovana
AU  - Otašević, Biljana
AU  - Malenović, Anđelija
AU  - Protić, Ana
PY  - 2021
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4694
AB  - Introduction: Cyclodextrin (CD) added to RPHPLC
mobile phase interacts with analytes,
solvent components and stationary phase surface.
Therefore, the retention is influenced by the
analyte’s distribution between CD dissolved in the
mobile phase, free CD and formed inclusion
complex adsorbed onto the stationary phase, and
stationary phase itself (1, 2). The research goal
was to reveal the structural characteristics affecting
the inclusion complexation and retention in these
kinds of chromatographic systems by employing
QSRR-ANN models. Materials and Methods: Mixed QSRR model
included large pool of molecular descriptors,
complex association constants and experimental
parameters towards the retention factor of
risperidone, olanzapine and structurally related
impurities. The experimental space was
adequately covered with central composite design,
while experiments were conducted on Dionex
Ultimate 3000 (U) HPLC. QSRR-ANN modelling
was performed in STATISTICA Neural Networks.
Results: To evaluate the individual influence of
each of the descriptors, the difference in the
highest and lowest retention factor value across
the investigated range of the descriptor’s values
was calculated. The highest ratios were associated
with the following descriptors RDF075m, UE,
Mor04v and CATS2D_08_PL, making them the
most contributing towards the selected output.
RDF075m descriptor shows the three-dimensional
mass distribution calculated at a distance of 7.5 Å
from the geometrical centre of the molecule and it
refers to steric factors at the same distance.
Groups approximately 7.5 Å distant from the
geometrical centre of risperidone, olanzapine and
related compounds in their optimized
conformations were determined. These groups
were the same ones involved in the complexation
process according to previously performed NMR
study. Identified groups and their steric factors are
the most important for the formation of inclusion
complexes, and, in this way, the value of RDF075m
contributes to the retention of the selected
compounds. The importance of Mor04v confirms
the influence of molecular size and shape in
retention in these kinds of chromatographic
systems, while CATS2D_08_PL accounts for
lipophilicity.
Conclusions: The current study resulted in
development of QSRR-ANN with remarkable
performances, which enabled the elucidation of the
molecular features significantly influencing the
retention in β-CD-modified RP-HPLC. The
pronounced effect of molecular structure on
retention was best described through RDF075m,
followed by UE, Mor04v and CATS2D_08_PL.
Retention behaviour is also highly affected by
molecular size and shape, as well as lipophilicity of
the investigated compounds. Moreover, the size
and polarity of the chosen CD should not be
neglected, due to the consequent structural fit.
PB  - Ankara University Faculty of Pharmacy
C3  - The 13th International Symposium on Pharmaceutical Sciences, Ankara, Turkey, 22-25. June 2021, Virtual event
T1  - QSRR-ANN modelling in β-CD-modified RP-HPLC
SP  - 104
EP  - 105
UR  - https://hdl.handle.net/21.15107/rcub_farfar_4694
ER  - 
@conference{
author = "Đajić, Nevena and Krmar, Jovana and Otašević, Biljana and Malenović, Anđelija and Protić, Ana",
year = "2021",
abstract = "Introduction: Cyclodextrin (CD) added to RPHPLC
mobile phase interacts with analytes,
solvent components and stationary phase surface.
Therefore, the retention is influenced by the
analyte’s distribution between CD dissolved in the
mobile phase, free CD and formed inclusion
complex adsorbed onto the stationary phase, and
stationary phase itself (1, 2). The research goal
was to reveal the structural characteristics affecting
the inclusion complexation and retention in these
kinds of chromatographic systems by employing
QSRR-ANN models. Materials and Methods: Mixed QSRR model
included large pool of molecular descriptors,
complex association constants and experimental
parameters towards the retention factor of
risperidone, olanzapine and structurally related
impurities. The experimental space was
adequately covered with central composite design,
while experiments were conducted on Dionex
Ultimate 3000 (U) HPLC. QSRR-ANN modelling
was performed in STATISTICA Neural Networks.
Results: To evaluate the individual influence of
each of the descriptors, the difference in the
highest and lowest retention factor value across
the investigated range of the descriptor’s values
was calculated. The highest ratios were associated
with the following descriptors RDF075m, UE,
Mor04v and CATS2D_08_PL, making them the
most contributing towards the selected output.
RDF075m descriptor shows the three-dimensional
mass distribution calculated at a distance of 7.5 Å
from the geometrical centre of the molecule and it
refers to steric factors at the same distance.
Groups approximately 7.5 Å distant from the
geometrical centre of risperidone, olanzapine and
related compounds in their optimized
conformations were determined. These groups
were the same ones involved in the complexation
process according to previously performed NMR
study. Identified groups and their steric factors are
the most important for the formation of inclusion
complexes, and, in this way, the value of RDF075m
contributes to the retention of the selected
compounds. The importance of Mor04v confirms
the influence of molecular size and shape in
retention in these kinds of chromatographic
systems, while CATS2D_08_PL accounts for
lipophilicity.
Conclusions: The current study resulted in
development of QSRR-ANN with remarkable
performances, which enabled the elucidation of the
molecular features significantly influencing the
retention in β-CD-modified RP-HPLC. The
pronounced effect of molecular structure on
retention was best described through RDF075m,
followed by UE, Mor04v and CATS2D_08_PL.
Retention behaviour is also highly affected by
molecular size and shape, as well as lipophilicity of
the investigated compounds. Moreover, the size
and polarity of the chosen CD should not be
neglected, due to the consequent structural fit.",
publisher = "Ankara University Faculty of Pharmacy",
journal = "The 13th International Symposium on Pharmaceutical Sciences, Ankara, Turkey, 22-25. June 2021, Virtual event",
title = "QSRR-ANN modelling in β-CD-modified RP-HPLC",
pages = "104-105",
url = "https://hdl.handle.net/21.15107/rcub_farfar_4694"
}
Đajić, N., Krmar, J., Otašević, B., Malenović, A.,& Protić, A.. (2021). QSRR-ANN modelling in β-CD-modified RP-HPLC. in The 13th International Symposium on Pharmaceutical Sciences, Ankara, Turkey, 22-25. June 2021, Virtual event
Ankara University Faculty of Pharmacy., 104-105.
https://hdl.handle.net/21.15107/rcub_farfar_4694
Đajić N, Krmar J, Otašević B, Malenović A, Protić A. QSRR-ANN modelling in β-CD-modified RP-HPLC. in The 13th International Symposium on Pharmaceutical Sciences, Ankara, Turkey, 22-25. June 2021, Virtual event. 2021;:104-105.
https://hdl.handle.net/21.15107/rcub_farfar_4694 .
Đajić, Nevena, Krmar, Jovana, Otašević, Biljana, Malenović, Anđelija, Protić, Ana, "QSRR-ANN modelling in β-CD-modified RP-HPLC" in The 13th International Symposium on Pharmaceutical Sciences, Ankara, Turkey, 22-25. June 2021, Virtual event (2021):104-105,
https://hdl.handle.net/21.15107/rcub_farfar_4694 .

Experimental design in HPLC separation of pharmaceuticals

Stojanović, Jevrem; Krmar, Jovana; Protić, Ana; Svrkota, Bojana; Đajić, Nevena; Otašević, Biljana

(Beograd : Savez farmaceutskih udruženja Srbije, 2021)

TY  - JOUR
AU  - Stojanović, Jevrem
AU  - Krmar, Jovana
AU  - Protić, Ana
AU  - Svrkota, Bojana
AU  - Đajić, Nevena
AU  - Otašević, Biljana
PY  - 2021
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/3951
AB  - Design of Experiments (DoE) is an indispensable tool in contemporary drug analysis as it
simultaneously balances a number of chromatographic parameters to ensure optimal separation
in High Pressure Liquid Chromatography (HPLC). This manuscript briefly outlines the theoretical
background of the DoE and provides step-by-step instruction for its implementation in HPLC
pharmaceutical practice. It particularly discusses the classification of various design types and
their possibilities to rationalize the different stages of HPLC method development workflow, such
as the selection of the most influential factors, factors optimization and assessment of the method
robustness. Additionally, the application of the DoE-based Analytical Quality by Design (AQbD)
concept in the LC method development has been summarized. Recent achievements in the use of
DoE in the development of stability-indicating LC and hyphenated LC-MS methods have also
been briefly reported. Performing of Quantitative structure retention relationship (QSRR) study
enhanced with DoE-based data collection was recomended as a future perspective in description
of retention in HPLC system.
AB  - Dizajn eksperimenata (DoE) je nezaobilazan alat u savremenoj analizi lekova budući da istovremeno balansira niz hromatografskih parametara kako bi se osiguralo optimalno razdvajanje u tečnoj hromatografiji pod visokim pritiskom (HPLC). Prikazana je teorijska osnova DOE i data su detaljna uputstva za njegovu primenu u HPLC ispitivanjima u farmaciji. Naročito se govori o klasifikaciji brojnih tipova dizajna i njihovim mogućnostima za racionalizaciju različitih faza tokom procesa razvoja HPLC metode, kao što su izbor najuticajnijih faktora, optimizacija faktora i procena robusnosti metode. Dodatno, sumirana je primena DOE kao sastavnog dela koncepta ugradnje kvaliteta u proizvod u domenu razvoja analitičkih metoda (AQbD) zasnovanih na HPLC tehnici. Takođe su prikazana i nedavna dostignuća u primeni DOE u razvoju LC metoda koje su pogodne za ispitivanje stabilnosti lekova, kao i LC-MS metoda. U budućoj perspektivi, preporučeno je izvođenje ispitivanja kvantitativnog odnosa između strukture i retencionog ponašanja (QSRR) analita u HPLC sistemu na osnovu podataka dobijenih primenom DOE.
PB  - Beograd : Savez farmaceutskih udruženja Srbije
T2  - Arhiv za farmaciju
T1  - Experimental design in HPLC separation of pharmaceuticals
T1  - Primena eksperimentalnog dizajna za razdvajanje lekova HPLC metodom
VL  - 71
IS  - 4
SP  - 279
EP  - 301
DO  - 10.5937/arhfarm71-32480
ER  - 
@article{
author = "Stojanović, Jevrem and Krmar, Jovana and Protić, Ana and Svrkota, Bojana and Đajić, Nevena and Otašević, Biljana",
year = "2021",
abstract = "Design of Experiments (DoE) is an indispensable tool in contemporary drug analysis as it
simultaneously balances a number of chromatographic parameters to ensure optimal separation
in High Pressure Liquid Chromatography (HPLC). This manuscript briefly outlines the theoretical
background of the DoE and provides step-by-step instruction for its implementation in HPLC
pharmaceutical practice. It particularly discusses the classification of various design types and
their possibilities to rationalize the different stages of HPLC method development workflow, such
as the selection of the most influential factors, factors optimization and assessment of the method
robustness. Additionally, the application of the DoE-based Analytical Quality by Design (AQbD)
concept in the LC method development has been summarized. Recent achievements in the use of
DoE in the development of stability-indicating LC and hyphenated LC-MS methods have also
been briefly reported. Performing of Quantitative structure retention relationship (QSRR) study
enhanced with DoE-based data collection was recomended as a future perspective in description
of retention in HPLC system., Dizajn eksperimenata (DoE) je nezaobilazan alat u savremenoj analizi lekova budući da istovremeno balansira niz hromatografskih parametara kako bi se osiguralo optimalno razdvajanje u tečnoj hromatografiji pod visokim pritiskom (HPLC). Prikazana je teorijska osnova DOE i data su detaljna uputstva za njegovu primenu u HPLC ispitivanjima u farmaciji. Naročito se govori o klasifikaciji brojnih tipova dizajna i njihovim mogućnostima za racionalizaciju različitih faza tokom procesa razvoja HPLC metode, kao što su izbor najuticajnijih faktora, optimizacija faktora i procena robusnosti metode. Dodatno, sumirana je primena DOE kao sastavnog dela koncepta ugradnje kvaliteta u proizvod u domenu razvoja analitičkih metoda (AQbD) zasnovanih na HPLC tehnici. Takođe su prikazana i nedavna dostignuća u primeni DOE u razvoju LC metoda koje su pogodne za ispitivanje stabilnosti lekova, kao i LC-MS metoda. U budućoj perspektivi, preporučeno je izvođenje ispitivanja kvantitativnog odnosa između strukture i retencionog ponašanja (QSRR) analita u HPLC sistemu na osnovu podataka dobijenih primenom DOE.",
publisher = "Beograd : Savez farmaceutskih udruženja Srbije",
journal = "Arhiv za farmaciju",
title = "Experimental design in HPLC separation of pharmaceuticals, Primena eksperimentalnog dizajna za razdvajanje lekova HPLC metodom",
volume = "71",
number = "4",
pages = "279-301",
doi = "10.5937/arhfarm71-32480"
}
Stojanović, J., Krmar, J., Protić, A., Svrkota, B., Đajić, N.,& Otašević, B.. (2021). Experimental design in HPLC separation of pharmaceuticals. in Arhiv za farmaciju
Beograd : Savez farmaceutskih udruženja Srbije., 71(4), 279-301.
https://doi.org/10.5937/arhfarm71-32480
Stojanović J, Krmar J, Protić A, Svrkota B, Đajić N, Otašević B. Experimental design in HPLC separation of pharmaceuticals. in Arhiv za farmaciju. 2021;71(4):279-301.
doi:10.5937/arhfarm71-32480 .
Stojanović, Jevrem, Krmar, Jovana, Protić, Ana, Svrkota, Bojana, Đajić, Nevena, Otašević, Biljana, "Experimental design in HPLC separation of pharmaceuticals" in Arhiv za farmaciju, 71, no. 4 (2021):279-301,
https://doi.org/10.5937/arhfarm71-32480 . .
7

The novel approach towards gradient elution HPLC method development

Milenković, Milan; Đajić, Nevena; Krmar, Jovana; Rašević, Marija; Malenović, Anđelija; Otašević, Biljana; Protić, Ana

(Ankara University Faculty of Pharmacy, 2021)

TY  - CONF
AU  - Milenković, Milan
AU  - Đajić, Nevena
AU  - Krmar, Jovana
AU  - Rašević, Marija
AU  - Malenović, Anđelija
AU  - Otašević, Biljana
AU  - Protić, Ana
PY  - 2021
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4696
AB  - Introduction: Gradient elution HPLC finds its
purpose in simultaneous analyses of solutes
covering wide range of polarities. However, the
instrument related factors, especially dwell volume, are frequently responsible for fizzy transfer and
short life cycle of the gradient elution method.
Therefore, it is advisable to incorporate dwell
volume into the optimization stage and avoid
transfer related failures. The chemometric
approach would enable selection of optimal
chromatographic conditions for different HPLC
instruments. The aim of this study was to propose
and test this approach in gradient elution method’s
development.
Materials and Methods: The experiments were
carried out on three chromatographic systems
(UPLC, UHPLC and HPLC), while the separation
was achieved on Kinetex C18 Core-shell column
(100 mm × 2.1 mm, 2.6 μm particle size). Design
of experiments was constructed in Design-Expert
11.0. Indirect modeling, grid point search and
graphical presentations were done in Matlab
7.10.0.
Results: Dabigatrane etexilate mesylate and nine
structurally related compounds were selected as
suitable model mixture due to its complexity and
polarity. Method development was supported with
experimental design methodology, Placket –
Burman for screening and D-optimal design for
optimization purposes. Dwell volumes were
included in the optimization phase and in this way
the same optimal chromatographic conditions for
all three instruments were selected. They included 10 mM ammonium acetate buffer
with pH set to 4.9 using acetic acid, and
acetonitrile. The components of the mobile phase
were pumped into chromatographic system with
flow rate of 400 μL min-1 in a linear gradient mode:
at 0 minutes 24% (v/v) acetonitrile and 76% (v/v) of
buffer solution, at 15 minutes 54% (v/v) acetonitrile
and 46% (v/v) buffer solution. At 16 minutes the
acetonitrile content was back to 24% (v/v) and 76%
(v/v) of buffer solution. The re-equilibration time
was set to 5 minutes. The examined
chromatographic region is graphically presented
and optimal conditions are noticed as the cross
sections (yellow dots). The method was validated
and confirmed its utility on all instruments.
Conclusions: The proposed methodology
demonstrated its ability to predict joint optimal
chromatographic conditions for instruments with different values of dwell volume. The potential was
confirmed on complex model mixture and
instruments significantly differing in dwell volume
values. In this way the gap between developing
and routine needs could be overwhelmed, followed
by facilitated transfer of methods.
PB  - Ankara University Faculty of Pharmacy
C3  - 13th International Symposium on Pharmaceutical Sciences (ISOPS), June 22-25, 2021, Ankara, Turkey
T1  - The novel approach towards gradient elution HPLC method development
SP  - 227
EP  - 228
UR  - https://hdl.handle.net/21.15107/rcub_farfar_4696
ER  - 
@conference{
author = "Milenković, Milan and Đajić, Nevena and Krmar, Jovana and Rašević, Marija and Malenović, Anđelija and Otašević, Biljana and Protić, Ana",
year = "2021",
abstract = "Introduction: Gradient elution HPLC finds its
purpose in simultaneous analyses of solutes
covering wide range of polarities. However, the
instrument related factors, especially dwell volume, are frequently responsible for fizzy transfer and
short life cycle of the gradient elution method.
Therefore, it is advisable to incorporate dwell
volume into the optimization stage and avoid
transfer related failures. The chemometric
approach would enable selection of optimal
chromatographic conditions for different HPLC
instruments. The aim of this study was to propose
and test this approach in gradient elution method’s
development.
Materials and Methods: The experiments were
carried out on three chromatographic systems
(UPLC, UHPLC and HPLC), while the separation
was achieved on Kinetex C18 Core-shell column
(100 mm × 2.1 mm, 2.6 μm particle size). Design
of experiments was constructed in Design-Expert
11.0. Indirect modeling, grid point search and
graphical presentations were done in Matlab
7.10.0.
Results: Dabigatrane etexilate mesylate and nine
structurally related compounds were selected as
suitable model mixture due to its complexity and
polarity. Method development was supported with
experimental design methodology, Placket –
Burman for screening and D-optimal design for
optimization purposes. Dwell volumes were
included in the optimization phase and in this way
the same optimal chromatographic conditions for
all three instruments were selected. They included 10 mM ammonium acetate buffer
with pH set to 4.9 using acetic acid, and
acetonitrile. The components of the mobile phase
were pumped into chromatographic system with
flow rate of 400 μL min-1 in a linear gradient mode:
at 0 minutes 24% (v/v) acetonitrile and 76% (v/v) of
buffer solution, at 15 minutes 54% (v/v) acetonitrile
and 46% (v/v) buffer solution. At 16 minutes the
acetonitrile content was back to 24% (v/v) and 76%
(v/v) of buffer solution. The re-equilibration time
was set to 5 minutes. The examined
chromatographic region is graphically presented
and optimal conditions are noticed as the cross
sections (yellow dots). The method was validated
and confirmed its utility on all instruments.
Conclusions: The proposed methodology
demonstrated its ability to predict joint optimal
chromatographic conditions for instruments with different values of dwell volume. The potential was
confirmed on complex model mixture and
instruments significantly differing in dwell volume
values. In this way the gap between developing
and routine needs could be overwhelmed, followed
by facilitated transfer of methods.",
publisher = "Ankara University Faculty of Pharmacy",
journal = "13th International Symposium on Pharmaceutical Sciences (ISOPS), June 22-25, 2021, Ankara, Turkey",
title = "The novel approach towards gradient elution HPLC method development",
pages = "227-228",
url = "https://hdl.handle.net/21.15107/rcub_farfar_4696"
}
Milenković, M., Đajić, N., Krmar, J., Rašević, M., Malenović, A., Otašević, B.,& Protić, A.. (2021). The novel approach towards gradient elution HPLC method development. in 13th International Symposium on Pharmaceutical Sciences (ISOPS), June 22-25, 2021, Ankara, Turkey
Ankara University Faculty of Pharmacy., 227-228.
https://hdl.handle.net/21.15107/rcub_farfar_4696
Milenković M, Đajić N, Krmar J, Rašević M, Malenović A, Otašević B, Protić A. The novel approach towards gradient elution HPLC method development. in 13th International Symposium on Pharmaceutical Sciences (ISOPS), June 22-25, 2021, Ankara, Turkey. 2021;:227-228.
https://hdl.handle.net/21.15107/rcub_farfar_4696 .
Milenković, Milan, Đajić, Nevena, Krmar, Jovana, Rašević, Marija, Malenović, Anđelija, Otašević, Biljana, Protić, Ana, "The novel approach towards gradient elution HPLC method development" in 13th International Symposium on Pharmaceutical Sciences (ISOPS), June 22-25, 2021, Ankara, Turkey (2021):227-228,
https://hdl.handle.net/21.15107/rcub_farfar_4696 .

A comprehensive study on retention of selected model substances in β-cyclodextrin-modified high performance liquid chromatography

Đajić, Nevena; Petković, Miloš; Zečević, Mira; Otašević, Biljana; Malenović, Anđelija; Holzgrabe, Ulrike; Protić, Ana

(Elsevier B.V., 2021)

TY  - JOUR
AU  - Đajić, Nevena
AU  - Petković, Miloš
AU  - Zečević, Mira
AU  - Otašević, Biljana
AU  - Malenović, Anđelija
AU  - Holzgrabe, Ulrike
AU  - Protić, Ana
PY  - 2021
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/3822
AB  - The quantitative structure-retention relationship (QSRR) models are not only employed in retention behaviour prediction, but also in an in-depth understanding of complex chromatographic systems. The goal of the present research is to enable the comprehensive understanding of retention underlying the separation in β-cyclodextrin (CD) modified reversed-phase high performance liquid chromatography (RP-HPLC) systems, through the development of mixed QSRR models. Moreover, the amount of β-CD adsorbed on the stationary phase surface (β-CDA) is added as the model's input in order to evaluate its contribution to both model performances and retention. Nuclear magnetic resonance (NMR) experiments were conducted to confirm the predicted inclusion complex structures and support the application of in silico tools. The most significant descriptors revealed that retention is governed by the steric factors 7.5 Å distant from the geometrical centre of a molecule, 3D arrangement of atoms determining the molecular size and shape, lipophilicity indicated by topological distances, as well as the unbound system's energy, related to the inclusion complex formation. In addition, a notable effect of the pH of the aqueous phase on the retention of ionizable analytes was shown. In the case of pH of the aqueous phase and β-CDA the change in retention behaviour of the studied analytes was observed only at the highest β-CDA value (5.17 μM/m2), but it was not related to the ionization state of analytes. When the analytes did not change the ionization form across the investigated studied pH range, and the acetonitrile content in the mobile phase was 25% (v/v), the retention factor had low values regardless of the β-CDA; under these circumstances the retention is probably acetonitrile driven.
PB  - Elsevier B.V.
T2  - Journal of Chromatography A
T1  - A comprehensive study on retention of selected model substances in β-cyclodextrin-modified high performance liquid chromatography
VL  - 1645
DO  - 10.1016/j.chroma.2021.462120
ER  - 
@article{
author = "Đajić, Nevena and Petković, Miloš and Zečević, Mira and Otašević, Biljana and Malenović, Anđelija and Holzgrabe, Ulrike and Protić, Ana",
year = "2021",
abstract = "The quantitative structure-retention relationship (QSRR) models are not only employed in retention behaviour prediction, but also in an in-depth understanding of complex chromatographic systems. The goal of the present research is to enable the comprehensive understanding of retention underlying the separation in β-cyclodextrin (CD) modified reversed-phase high performance liquid chromatography (RP-HPLC) systems, through the development of mixed QSRR models. Moreover, the amount of β-CD adsorbed on the stationary phase surface (β-CDA) is added as the model's input in order to evaluate its contribution to both model performances and retention. Nuclear magnetic resonance (NMR) experiments were conducted to confirm the predicted inclusion complex structures and support the application of in silico tools. The most significant descriptors revealed that retention is governed by the steric factors 7.5 Å distant from the geometrical centre of a molecule, 3D arrangement of atoms determining the molecular size and shape, lipophilicity indicated by topological distances, as well as the unbound system's energy, related to the inclusion complex formation. In addition, a notable effect of the pH of the aqueous phase on the retention of ionizable analytes was shown. In the case of pH of the aqueous phase and β-CDA the change in retention behaviour of the studied analytes was observed only at the highest β-CDA value (5.17 μM/m2), but it was not related to the ionization state of analytes. When the analytes did not change the ionization form across the investigated studied pH range, and the acetonitrile content in the mobile phase was 25% (v/v), the retention factor had low values regardless of the β-CDA; under these circumstances the retention is probably acetonitrile driven.",
publisher = "Elsevier B.V.",
journal = "Journal of Chromatography A",
title = "A comprehensive study on retention of selected model substances in β-cyclodextrin-modified high performance liquid chromatography",
volume = "1645",
doi = "10.1016/j.chroma.2021.462120"
}
Đajić, N., Petković, M., Zečević, M., Otašević, B., Malenović, A., Holzgrabe, U.,& Protić, A.. (2021). A comprehensive study on retention of selected model substances in β-cyclodextrin-modified high performance liquid chromatography. in Journal of Chromatography A
Elsevier B.V.., 1645.
https://doi.org/10.1016/j.chroma.2021.462120
Đajić N, Petković M, Zečević M, Otašević B, Malenović A, Holzgrabe U, Protić A. A comprehensive study on retention of selected model substances in β-cyclodextrin-modified high performance liquid chromatography. in Journal of Chromatography A. 2021;1645.
doi:10.1016/j.chroma.2021.462120 .
Đajić, Nevena, Petković, Miloš, Zečević, Mira, Otašević, Biljana, Malenović, Anđelija, Holzgrabe, Ulrike, Protić, Ana, "A comprehensive study on retention of selected model substances in β-cyclodextrin-modified high performance liquid chromatography" in Journal of Chromatography A, 1645 (2021),
https://doi.org/10.1016/j.chroma.2021.462120 . .
3
2

Hemometrijski podržana karakterizacija hromatografskih sistema modifikovanih beta-ciklodekstrinom sa model supstancama

Đajić, Nevena

(Универзитет у Београду, Фармацеутски факултет, 2021)

TY  - THES
AU  - Đajić, Nevena
PY  - 2021
UR  - http://eteze.bg.ac.rs/application/showtheses?thesesId=8477
UR  - https://fedorabg.bg.ac.rs/fedora/get/o:24878/bdef:Content/download
UR  - http://vbs.rs/scripts/cobiss?command=DISPLAY&base=70036&RID=49073417
UR  - https://nardus.mpn.gov.rs/handle/123456789/18910
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4044
AB  - Ciklodekstrini (eng. Cyclodextrins – CDs) su poznati po svojoj sposobnosti da grade inkluzione komplekse sa različitim molekulima. Ova osobina je odgovorna za njihovu primenu kao aditiva mobilne faze u razvoju ekološki prihvatljivih metoda reverzno-fazne tečne hromatografije pod visokim pritiskom (eng. Reversed-Phase High-Performance Liquid Chromatography – RP-HPLC). Sprovedena je karakterizacija inkluzionih kompleksa koji se formiraju između β-CD-a i odabrane model smeše, koju čine risperidon, olanzapin i njihove srodne supstance. Stehiometrija kompleksa 1:1 je potvrđena masenom spektrometrijom sa elektrosprej jonizacijom. Molekulskom doking studijom predviđene su termodinamički najstabilnije strukture inkluzionih kompleksa, koje su potvrđene nuklearnom magnetno-rezonantnom spektroskopijom. Uspostavljen je kvantitativni odnos strukture i retencije (eng. Quantitative Structure-Retention Relationship – QSRR) uključivanjem deskriptora koji opisuju inkluzione komplekse, molekulskih deskriptora i eksperimentalnih parametara. QSRR model razvijen uz pomoć veštačkih neuronskih mreža (eng. Artificial Neural Network – ANN) je primenjen u razvoju ekološki prihvatljivih RP-HPLC metoda. i izračunavanju konstanti stabilnosti i termodinamičkih parametara kompleksiranja. Otkriveno je da HPLC metoda nije univerzalno primenljiva u izračunavanju navedenih parametara. U sistemu gde β-CD nije prisutan u mobilnoj fazi, uočeno je razdvajanje pika srodne supstance B od pika inkluzionog kompleksa, a detekcija je sprovedena detektorom naelektrisanja u aerosolu. Kod supstanci gde nije došlo do navedenog razdvajanja, predložen je novi metodološki pristup izračunavanju konstanti stabilnosti. Razvijen je i QSRR-ANN model sa opsežnim setom molekulskih deskriptora, koji je omogućio identifikaciju strukturnih karakteristika od značaja za formiranje inkluzionih kompleksa i retenciono ponašanje model supstanci. Utvrđeno je da retenciono ponašanje u velikoj meri zavisi od molekulskih dimenzija i oblika, lipofilnosti i udaljenosti od geometrijskog centra grupa koje ostvaruju interakcije sa β-CD-om.
PB  - Универзитет у Београду, Фармацеутски факултет
T2  - Универзитет у Београду
T1  - Hemometrijski podržana karakterizacija hromatografskih sistema modifikovanih beta-ciklodekstrinom sa model supstancama
UR  - https://hdl.handle.net/21.15107/rcub_nardus_18910
ER  - 
@phdthesis{
author = "Đajić, Nevena",
year = "2021",
abstract = "Ciklodekstrini (eng. Cyclodextrins – CDs) su poznati po svojoj sposobnosti da grade inkluzione komplekse sa različitim molekulima. Ova osobina je odgovorna za njihovu primenu kao aditiva mobilne faze u razvoju ekološki prihvatljivih metoda reverzno-fazne tečne hromatografije pod visokim pritiskom (eng. Reversed-Phase High-Performance Liquid Chromatography – RP-HPLC). Sprovedena je karakterizacija inkluzionih kompleksa koji se formiraju između β-CD-a i odabrane model smeše, koju čine risperidon, olanzapin i njihove srodne supstance. Stehiometrija kompleksa 1:1 je potvrđena masenom spektrometrijom sa elektrosprej jonizacijom. Molekulskom doking studijom predviđene su termodinamički najstabilnije strukture inkluzionih kompleksa, koje su potvrđene nuklearnom magnetno-rezonantnom spektroskopijom. Uspostavljen je kvantitativni odnos strukture i retencije (eng. Quantitative Structure-Retention Relationship – QSRR) uključivanjem deskriptora koji opisuju inkluzione komplekse, molekulskih deskriptora i eksperimentalnih parametara. QSRR model razvijen uz pomoć veštačkih neuronskih mreža (eng. Artificial Neural Network – ANN) je primenjen u razvoju ekološki prihvatljivih RP-HPLC metoda. i izračunavanju konstanti stabilnosti i termodinamičkih parametara kompleksiranja. Otkriveno je da HPLC metoda nije univerzalno primenljiva u izračunavanju navedenih parametara. U sistemu gde β-CD nije prisutan u mobilnoj fazi, uočeno je razdvajanje pika srodne supstance B od pika inkluzionog kompleksa, a detekcija je sprovedena detektorom naelektrisanja u aerosolu. Kod supstanci gde nije došlo do navedenog razdvajanja, predložen je novi metodološki pristup izračunavanju konstanti stabilnosti. Razvijen je i QSRR-ANN model sa opsežnim setom molekulskih deskriptora, koji je omogućio identifikaciju strukturnih karakteristika od značaja za formiranje inkluzionih kompleksa i retenciono ponašanje model supstanci. Utvrđeno je da retenciono ponašanje u velikoj meri zavisi od molekulskih dimenzija i oblika, lipofilnosti i udaljenosti od geometrijskog centra grupa koje ostvaruju interakcije sa β-CD-om.",
publisher = "Универзитет у Београду, Фармацеутски факултет",
journal = "Универзитет у Београду",
title = "Hemometrijski podržana karakterizacija hromatografskih sistema modifikovanih beta-ciklodekstrinom sa model supstancama",
url = "https://hdl.handle.net/21.15107/rcub_nardus_18910"
}
Đajić, N.. (2021). Hemometrijski podržana karakterizacija hromatografskih sistema modifikovanih beta-ciklodekstrinom sa model supstancama. in Универзитет у Београду
Универзитет у Београду, Фармацеутски факултет..
https://hdl.handle.net/21.15107/rcub_nardus_18910
Đajić N. Hemometrijski podržana karakterizacija hromatografskih sistema modifikovanih beta-ciklodekstrinom sa model supstancama. in Универзитет у Београду. 2021;.
https://hdl.handle.net/21.15107/rcub_nardus_18910 .
Đajić, Nevena, "Hemometrijski podržana karakterizacija hromatografskih sistema modifikovanih beta-ciklodekstrinom sa model supstancama" in Универзитет у Београду (2021),
https://hdl.handle.net/21.15107/rcub_nardus_18910 .

Chemometrically supported UHPLC method development: a strategy for achieving eco‐friendliness

Đajić, Nevena; Krmar, Jovana; Otašević, Biljana; Protić, Ana

(Savez farmaceutskih udruženja Srbije (SFUS), 2021)

TY  - CONF
AU  - Đajić, Nevena
AU  - Krmar, Jovana
AU  - Otašević, Biljana
AU  - Protić, Ana
PY  - 2021
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4680
AB  - Burden of potentially harmful effects of analytical techniques used in pharmaceutical analysis
on human health and environment has recently shown a dramatic increase (1). Therefore, analytical
methods able to minimize the production of hazardous waste and use less energy are developing.
Reversed-phase high performance liquid chromatography (RP-HPLC) is the most frequently used
technique in determination of various compounds, due to its representative analytical features (2).
However, RP-HPLC is associated with a substantial amount of waste. Simultaneously, pharmaceutical
industry seeks for technologies that produce high resolution within a reduced analysis time without
loss of separation efficiency (3). Using fully porous sub-2-μm stationary phase particles provides better
resolution in comparison to traditional HPLC stationary phases. However, it causes high column
backpressure and thus initiated development of ultra high performance liquid chromatography
(UHPLC) instruments. Along with reduced particle size, UHPLC uses shorter columns, which leads to
diminished analysis time and minimized production of waste comparing to HPLC. In that respect,
UHPLC method for separation of dronedarone hydrochloride and its degradation products was
developed utilizing experimental design methodology. Model mixture was selected to cover diversity in
physicochemical characteristics. Compounds’ varying polarity represents a challenge from the
analytical point of view. Dronedarone hydrochloride is lipophilic, thus requires substantial amounts of
organic solvent for its elution. In that respect, there is a recognized need for developing a
chromatographic method able to separate the aforementioned compounds with reduced organic
solvent consumption and/or analysis time. Preliminary experiments determined factors with
significant influence on retention. These factors, namely the initial and final content of acetonitrile and
time of gradient were varied according to central composite design. The goal was to achieve satisfying
separation between critical peak pairs. Firstly, mathematical models for the time of start and end of
peak of each critical pair were obtained. Afterwards, the separation factor (S) standing for the distance
between peaks in one critical pair was indirectly modelled. An appropriate separation is achieved if S is
higher than zero, which was accomplished with the initial content of acetonitrile of 6% (v/v), the final
content of acetonitrile of 50% (v/v), and the gradient duration of 5 min. Ecological acceptability of
UHPLC method was evaluated with green analytical procedure index (GAPI), which confirmed eco-
friendliness. GAPI showed that the most critical segment is the sample collection and that the
advantage should be given to UHPLC over HPLC in terms of energy saving.
AB  - Opterećenje štetnim uticajem analitičkih tehnika koje se koriste u farmaceutskoj
analizi na zdravlje ljudi i životnu sredinu je doživelo dramatičan porast (1). Iz tog razloga,
razvijaju se metode koje generišu manje štetnog otpada i koriste manje energije. Reverzno-
fazna tečna hromatografija pod visokim pritiskom (RP-HPLC) je najčešće korišćena tehnika u
određivanju različitih jedinjenja, zahvaljujući svojim reprezentativnim analitičkim
osobinama (2). Sa druge strane, primenom RP-HPLC proizvode se značajne količine otpada.
U isto vreme, farmaceutska industrija je u potrazi za tehnikama, koje će obezbediti visoku
rezoluciju u redukovanom vremenu trajanja analize, bez gubitka efikasnosti razdvajanja (3).
Korišćenjem stacionarnih faze sa potpuno poroznim česticama veličine ispod 2 μm
obezbeđuje bolju rezoluciju u poređenju sa tradicionalnim HPLC stacionarnim fazama.
Međutim, one dovode do visokih pritisaka, koji su kompatibilni sa instrumentima za
izvođenje hromatografije pod veoma visokim pritiskom (UHPLC). UHPLC instrumenti koriste
više pritiske u kraćim kolona sa smanjenom veličinom čestica, što dovodi do kraćeg trajanja
analize i manje produkcije otpada nego kod HPLC. UHPLC metoda za razdvajanje dronedaron
hidrohlorida i degradacionih proizvoda razvijena je korišćenjem metodologije
eksperimentalnog dizajna. Model smeša je odbrana kako bi se pokrile raznovrsne fizičko-
hemijske osobine. Različita polarnost ispitivanih jedinjenja predstavljala izazov sa aspekta
analitike. Dronedaron hidrohlorid je lipofilan, pa je za njegovo eluiranje potrebna značajna
količina organskog rastvarača. Prema tome, postoji potreba za razvojem hromatografske
metode za razdvajanje ovih jedinjenja sa redukovanom upotrebom organskog rastvarača i/ili
smanjenim trajanjem analize. Preliminarni eksperimenti su odredili faktore sa značajnim
uticajem na retenciju. Ovi faktori, početni i krajnji udeo acetonitrila i vreme trajanja
gradijenta su varirani prema centralnom kompozicionom dizajnu. Cilj je bio da se postigne
zadovoljavajuće razdvajanje između kritičnih parova. Prvo su dobijeni matematički modeli
za vreme početka i kraja pika svakog kritičnog para. Nakon toga, indirektno je modelovan
separacioni faktor (S), koji predstavlja razdaljinu između dva pika jednog kritičnog para. Do
odgovarajućeg razdvajanja dolazi ukoliko je S veći od 0, što se postiže sa početnim udelom
acetonitrila od 6% (v/v), krajnjim udelom acetonitrila od 50% (v/v) i trajanjem gradijenta
od 5 minuta. Ekološka prihvatljivost UHPLC metode je potvrđena određivanjem indeksa
ekološke prihvatljivosti analitičke procedure (GAPI). GAPI je pokazao da je najkritičniji
segment prikupljanje uzorka, kao i da u pogledu energetske uštede prednost nad HPLC treba
dati UHPLC metodi.
PB  - Savez farmaceutskih udruženja Srbije (SFUS)
C3  - Arhiv za farmaciju
T1  - Chemometrically supported UHPLC method development: a strategy for achieving eco‐friendliness
T1  - Hemometrijski podržan razvoj UHPLC metode: strategija za postizanje ekološke prihvatljivosti
VL  - 71
IS  - 5 suplement
SP  - S124
EP  - S125
UR  - https://hdl.handle.net/21.15107/rcub_farfar_4680
ER  - 
@conference{
author = "Đajić, Nevena and Krmar, Jovana and Otašević, Biljana and Protić, Ana",
year = "2021",
abstract = "Burden of potentially harmful effects of analytical techniques used in pharmaceutical analysis
on human health and environment has recently shown a dramatic increase (1). Therefore, analytical
methods able to minimize the production of hazardous waste and use less energy are developing.
Reversed-phase high performance liquid chromatography (RP-HPLC) is the most frequently used
technique in determination of various compounds, due to its representative analytical features (2).
However, RP-HPLC is associated with a substantial amount of waste. Simultaneously, pharmaceutical
industry seeks for technologies that produce high resolution within a reduced analysis time without
loss of separation efficiency (3). Using fully porous sub-2-μm stationary phase particles provides better
resolution in comparison to traditional HPLC stationary phases. However, it causes high column
backpressure and thus initiated development of ultra high performance liquid chromatography
(UHPLC) instruments. Along with reduced particle size, UHPLC uses shorter columns, which leads to
diminished analysis time and minimized production of waste comparing to HPLC. In that respect,
UHPLC method for separation of dronedarone hydrochloride and its degradation products was
developed utilizing experimental design methodology. Model mixture was selected to cover diversity in
physicochemical characteristics. Compounds’ varying polarity represents a challenge from the
analytical point of view. Dronedarone hydrochloride is lipophilic, thus requires substantial amounts of
organic solvent for its elution. In that respect, there is a recognized need for developing a
chromatographic method able to separate the aforementioned compounds with reduced organic
solvent consumption and/or analysis time. Preliminary experiments determined factors with
significant influence on retention. These factors, namely the initial and final content of acetonitrile and
time of gradient were varied according to central composite design. The goal was to achieve satisfying
separation between critical peak pairs. Firstly, mathematical models for the time of start and end of
peak of each critical pair were obtained. Afterwards, the separation factor (S) standing for the distance
between peaks in one critical pair was indirectly modelled. An appropriate separation is achieved if S is
higher than zero, which was accomplished with the initial content of acetonitrile of 6% (v/v), the final
content of acetonitrile of 50% (v/v), and the gradient duration of 5 min. Ecological acceptability of
UHPLC method was evaluated with green analytical procedure index (GAPI), which confirmed eco-
friendliness. GAPI showed that the most critical segment is the sample collection and that the
advantage should be given to UHPLC over HPLC in terms of energy saving., Opterećenje štetnim uticajem analitičkih tehnika koje se koriste u farmaceutskoj
analizi na zdravlje ljudi i životnu sredinu je doživelo dramatičan porast (1). Iz tog razloga,
razvijaju se metode koje generišu manje štetnog otpada i koriste manje energije. Reverzno-
fazna tečna hromatografija pod visokim pritiskom (RP-HPLC) je najčešće korišćena tehnika u
određivanju različitih jedinjenja, zahvaljujući svojim reprezentativnim analitičkim
osobinama (2). Sa druge strane, primenom RP-HPLC proizvode se značajne količine otpada.
U isto vreme, farmaceutska industrija je u potrazi za tehnikama, koje će obezbediti visoku
rezoluciju u redukovanom vremenu trajanja analize, bez gubitka efikasnosti razdvajanja (3).
Korišćenjem stacionarnih faze sa potpuno poroznim česticama veličine ispod 2 μm
obezbeđuje bolju rezoluciju u poređenju sa tradicionalnim HPLC stacionarnim fazama.
Međutim, one dovode do visokih pritisaka, koji su kompatibilni sa instrumentima za
izvođenje hromatografije pod veoma visokim pritiskom (UHPLC). UHPLC instrumenti koriste
više pritiske u kraćim kolona sa smanjenom veličinom čestica, što dovodi do kraćeg trajanja
analize i manje produkcije otpada nego kod HPLC. UHPLC metoda za razdvajanje dronedaron
hidrohlorida i degradacionih proizvoda razvijena je korišćenjem metodologije
eksperimentalnog dizajna. Model smeša je odbrana kako bi se pokrile raznovrsne fizičko-
hemijske osobine. Različita polarnost ispitivanih jedinjenja predstavljala izazov sa aspekta
analitike. Dronedaron hidrohlorid je lipofilan, pa je za njegovo eluiranje potrebna značajna
količina organskog rastvarača. Prema tome, postoji potreba za razvojem hromatografske
metode za razdvajanje ovih jedinjenja sa redukovanom upotrebom organskog rastvarača i/ili
smanjenim trajanjem analize. Preliminarni eksperimenti su odredili faktore sa značajnim
uticajem na retenciju. Ovi faktori, početni i krajnji udeo acetonitrila i vreme trajanja
gradijenta su varirani prema centralnom kompozicionom dizajnu. Cilj je bio da se postigne
zadovoljavajuće razdvajanje između kritičnih parova. Prvo su dobijeni matematički modeli
za vreme početka i kraja pika svakog kritičnog para. Nakon toga, indirektno je modelovan
separacioni faktor (S), koji predstavlja razdaljinu između dva pika jednog kritičnog para. Do
odgovarajućeg razdvajanja dolazi ukoliko je S veći od 0, što se postiže sa početnim udelom
acetonitrila od 6% (v/v), krajnjim udelom acetonitrila od 50% (v/v) i trajanjem gradijenta
od 5 minuta. Ekološka prihvatljivost UHPLC metode je potvrđena određivanjem indeksa
ekološke prihvatljivosti analitičke procedure (GAPI). GAPI je pokazao da je najkritičniji
segment prikupljanje uzorka, kao i da u pogledu energetske uštede prednost nad HPLC treba
dati UHPLC metodi.",
publisher = "Savez farmaceutskih udruženja Srbije (SFUS)",
journal = "Arhiv za farmaciju",
title = "Chemometrically supported UHPLC method development: a strategy for achieving eco‐friendliness, Hemometrijski podržan razvoj UHPLC metode: strategija za postizanje ekološke prihvatljivosti",
volume = "71",
number = "5 suplement",
pages = "S124-S125",
url = "https://hdl.handle.net/21.15107/rcub_farfar_4680"
}
Đajić, N., Krmar, J., Otašević, B.,& Protić, A.. (2021). Chemometrically supported UHPLC method development: a strategy for achieving eco‐friendliness. in Arhiv za farmaciju
Savez farmaceutskih udruženja Srbije (SFUS)., 71(5 suplement), S124-S125.
https://hdl.handle.net/21.15107/rcub_farfar_4680
Đajić N, Krmar J, Otašević B, Protić A. Chemometrically supported UHPLC method development: a strategy for achieving eco‐friendliness. in Arhiv za farmaciju. 2021;71(5 suplement):S124-S125.
https://hdl.handle.net/21.15107/rcub_farfar_4680 .
Đajić, Nevena, Krmar, Jovana, Otašević, Biljana, Protić, Ana, "Chemometrically supported UHPLC method development: a strategy for achieving eco‐friendliness" in Arhiv za farmaciju, 71, no. 5 suplement (2021):S124-S125,
https://hdl.handle.net/21.15107/rcub_farfar_4680 .

Influence of charged aerosol detector parameters on the response of chosen analytes in the mixed‐mode chromatography system

Krmar, Jovana; Svrkota, Bojana; Đajić, Nevena; Protić, Ana; Otašević, Biljana

(Savez farmaceutskih udruženja Srbije (SFUS), 2021)

TY  - CONF
AU  - Krmar, Jovana
AU  - Svrkota, Bojana
AU  - Đajić, Nevena
AU  - Protić, Ana
AU  - Otašević, Biljana
PY  - 2021
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4679
AB  - With respect to significant market presence (50%), the analysis of pharmaceuticals containing
counterions is a crucial component of the drug development life cycle, quality control and lot release
processes (1). Mixed-Mode Chromatography (MMC) offers the ability to simultaneously separate
cationic and anionic species within a single run, streamlining the laboratory processes (2). However,
the detection of typical counterions leaves analysts little room for maneuver. In recent years, the
counterions are efficiently detected with the help of Charged Aerosol Detector (CAD) that generates a
signal independent of the chemical structure (3). In this regard, the use of MMC-CAD hyphenated
technique rationalizes the number of individual analytical activities required for analyte and
counterion testing, causes no resource depletion and ultimately supports the concept of sustainability
in contemporary drug analysis. In this paper, the influence of the CAD parameters on the response of
diclofenac potassium and tramadol hydrochloride was studied performing systematic variations. The
analyses were carried out on Acclaim™ Mixed-mode WCX-1 (2.1 x 150 nm, 3 μm) column that provides
both hydrophobic reversed-phase and weak cation-exchange properties. Satisfactory separation of the
active pharmaceutical ingredients and their counterions was achieved using a mixture of 90 mM
acetate buffer at pH 5 (A) and acetonitrile (B). The isocratic elution (40% B) was performed at a flow
rate of 0.4 mL/min. Based on preliminary experiments, the following variables were identified as
significant and, thus, tested at the listed values: evaporation temperature (35ºC and 50ºC), filter
constant (1 s, 5 s and 10 s) and power function value (0.8, 1.0 and 1.2). The results showed that the
evaporation temperature had a positive impact on the signal-to-noise (S/N) ratios. On the other hand,
the peak area and the peak height decreased significantly upon raising the temperature. This finding
pointed out a strong need for fine tuning of mentioned parameter with respect to the analytes’
volatility. The increase in the value of the filter constant led to a baseline smoothing as well as peak
broadening. The filter constant set at 5 s resulted in the largest S/N ratios. The power function value,
which directly modified the CAD signal, exhibited an obvious negative effect toward the peak area. In
light of the above, optimal CAD detection of diclofenac, tramadol, potassium and chlorine was achieved
at the following settings: filter constant 5 s, power function value 0.8 and evaporation temperature
35ºC
AB  - S obzirom na veliku tržišnu zastupljenost farmaceutskih proizvoda koji sadrže kontra-
jone (50%), analiza istih ključna je komponenta procesa razvoja leka, kontrole kvaliteta i
puštanje serije leka u promet (1). Multimodalna hromatografija (eng. Mixed‐Mode
Chromatography, MMC) nudi moguć nost istovremene separacije katjonskih i anjonskih vrsta
na jednoj koloni, pojednostavljujući time laboratorijske procese (2). Međutim, izbor tehnika
za detekciju tipičnih kontra-jona veoma je sužen. Poslednjih godina, kontra-joni efikasno se
detektuju uz pomoć detektora naelektrisanja u aerosolu (eng. Charged Aerosol Detector,
CAD) koji generiše signal nezavisan od hemijske strukture (3). S navedenim u vezi, smatra se
da upotreba MMC-CAD tehnike racionalizuje broj pojedinačnih analitičkih aktivnosti
potrebnih za kontrolu kvaliteta analita i kontra-jona, smanjuje iscrpljivanje resursa i time
podržava koncept održivosti u domenu savremene analitike lekova. U ovom radu proučavan
je uticaj sistemskog variranja parametara CAD detektora na odgovor diklofenak-kalijuma i
tramadol-hidrohlorida. Hromatografkse analize izvedene su na Acclaim ™ Mixed‐mode WCX‐1
(2,1 x 150 nm, 3 μm) koloni koja kombinuje hidrofobne reverzno-fazne i mehanizme slabe
katjonske izmene. Zadovoljavajuće razdvajanje aktivnih farmaceutskih supstanci i njihovih
kontra-jona postignuto je upotrebom 90 mM acetatnog pufera pri pH 5 (A) i acetonitrila (B).
Korišćeno je izokratsko eluiranje mobilne faze (40% B), pri protoku od 0,4 mL/min. Na
osnovu preliminarnih eksperimenata, sledeć i faktori identifikovani su kao značajni, te su
testirani pri navedenim vrednostima: temperatura isparavanja (35ºC i 50ºC), konstanta
filtera (1 s, 5 s i 10 s) i vrednost stepene funkcije (0,8, 1,0 i 1,2). Rezultati su pokazali da je
temperatura isparavanja imala pozitivan efekat na odnos signal/šum (eng. signal‐to‐noise,
S/N). S druge strane, visina i površina pika značajno su se smanjili pri poveć anju
temperature. Ovaj nalaz ukazao je na snažnu potrebu za finim podešavanjem pomenutog
parametra imajući u vidu isparljivost analita. Poveć anje vrednosti konstante filtera dovelo je
do boljeg izgleda bazne linije, ali i do širenja pikova. Konstanta filtera postavljena na 5 s
rezultirala je najveć im vrednostima odnosa S/N. Vrednost stepene funkcije, koja je direktno
modifikovala CAD signal, pokazala je očigledan negativan efekat na površinu pika. U svetlu
eksperimentalnih nalaza, optimalna CAD detekcija diklofenaka, tramadola, kalijuma i hlora
postignuta je pri postavkama: konstanta filtera 5 s, vrednost funkcije snage 0,8 i temperatura
isparavanja 35ºC.
PB  - Savez farmaceutskih udruženja Srbije (SFUS)
C3  - Arhiv za farmaciju
T1  - Influence of charged aerosol detector parameters on the response of chosen analytes in the mixed‐mode chromatography system
T1  - Uticaj parametara detektora naelektirsanja u aerosolu na odgovore odabranih analita u sistemu multimodalne hromatografije
VL  - 71
IS  - 5 suplement
SP  - S122
EP  - S123
UR  - https://hdl.handle.net/21.15107/rcub_farfar_4679
ER  - 
@conference{
author = "Krmar, Jovana and Svrkota, Bojana and Đajić, Nevena and Protić, Ana and Otašević, Biljana",
year = "2021",
abstract = "With respect to significant market presence (50%), the analysis of pharmaceuticals containing
counterions is a crucial component of the drug development life cycle, quality control and lot release
processes (1). Mixed-Mode Chromatography (MMC) offers the ability to simultaneously separate
cationic and anionic species within a single run, streamlining the laboratory processes (2). However,
the detection of typical counterions leaves analysts little room for maneuver. In recent years, the
counterions are efficiently detected with the help of Charged Aerosol Detector (CAD) that generates a
signal independent of the chemical structure (3). In this regard, the use of MMC-CAD hyphenated
technique rationalizes the number of individual analytical activities required for analyte and
counterion testing, causes no resource depletion and ultimately supports the concept of sustainability
in contemporary drug analysis. In this paper, the influence of the CAD parameters on the response of
diclofenac potassium and tramadol hydrochloride was studied performing systematic variations. The
analyses were carried out on Acclaim™ Mixed-mode WCX-1 (2.1 x 150 nm, 3 μm) column that provides
both hydrophobic reversed-phase and weak cation-exchange properties. Satisfactory separation of the
active pharmaceutical ingredients and their counterions was achieved using a mixture of 90 mM
acetate buffer at pH 5 (A) and acetonitrile (B). The isocratic elution (40% B) was performed at a flow
rate of 0.4 mL/min. Based on preliminary experiments, the following variables were identified as
significant and, thus, tested at the listed values: evaporation temperature (35ºC and 50ºC), filter
constant (1 s, 5 s and 10 s) and power function value (0.8, 1.0 and 1.2). The results showed that the
evaporation temperature had a positive impact on the signal-to-noise (S/N) ratios. On the other hand,
the peak area and the peak height decreased significantly upon raising the temperature. This finding
pointed out a strong need for fine tuning of mentioned parameter with respect to the analytes’
volatility. The increase in the value of the filter constant led to a baseline smoothing as well as peak
broadening. The filter constant set at 5 s resulted in the largest S/N ratios. The power function value,
which directly modified the CAD signal, exhibited an obvious negative effect toward the peak area. In
light of the above, optimal CAD detection of diclofenac, tramadol, potassium and chlorine was achieved
at the following settings: filter constant 5 s, power function value 0.8 and evaporation temperature
35ºC, S obzirom na veliku tržišnu zastupljenost farmaceutskih proizvoda koji sadrže kontra-
jone (50%), analiza istih ključna je komponenta procesa razvoja leka, kontrole kvaliteta i
puštanje serije leka u promet (1). Multimodalna hromatografija (eng. Mixed‐Mode
Chromatography, MMC) nudi moguć nost istovremene separacije katjonskih i anjonskih vrsta
na jednoj koloni, pojednostavljujući time laboratorijske procese (2). Međutim, izbor tehnika
za detekciju tipičnih kontra-jona veoma je sužen. Poslednjih godina, kontra-joni efikasno se
detektuju uz pomoć detektora naelektrisanja u aerosolu (eng. Charged Aerosol Detector,
CAD) koji generiše signal nezavisan od hemijske strukture (3). S navedenim u vezi, smatra se
da upotreba MMC-CAD tehnike racionalizuje broj pojedinačnih analitičkih aktivnosti
potrebnih za kontrolu kvaliteta analita i kontra-jona, smanjuje iscrpljivanje resursa i time
podržava koncept održivosti u domenu savremene analitike lekova. U ovom radu proučavan
je uticaj sistemskog variranja parametara CAD detektora na odgovor diklofenak-kalijuma i
tramadol-hidrohlorida. Hromatografkse analize izvedene su na Acclaim ™ Mixed‐mode WCX‐1
(2,1 x 150 nm, 3 μm) koloni koja kombinuje hidrofobne reverzno-fazne i mehanizme slabe
katjonske izmene. Zadovoljavajuće razdvajanje aktivnih farmaceutskih supstanci i njihovih
kontra-jona postignuto je upotrebom 90 mM acetatnog pufera pri pH 5 (A) i acetonitrila (B).
Korišćeno je izokratsko eluiranje mobilne faze (40% B), pri protoku od 0,4 mL/min. Na
osnovu preliminarnih eksperimenata, sledeć i faktori identifikovani su kao značajni, te su
testirani pri navedenim vrednostima: temperatura isparavanja (35ºC i 50ºC), konstanta
filtera (1 s, 5 s i 10 s) i vrednost stepene funkcije (0,8, 1,0 i 1,2). Rezultati su pokazali da je
temperatura isparavanja imala pozitivan efekat na odnos signal/šum (eng. signal‐to‐noise,
S/N). S druge strane, visina i površina pika značajno su se smanjili pri poveć anju
temperature. Ovaj nalaz ukazao je na snažnu potrebu za finim podešavanjem pomenutog
parametra imajući u vidu isparljivost analita. Poveć anje vrednosti konstante filtera dovelo je
do boljeg izgleda bazne linije, ali i do širenja pikova. Konstanta filtera postavljena na 5 s
rezultirala je najveć im vrednostima odnosa S/N. Vrednost stepene funkcije, koja je direktno
modifikovala CAD signal, pokazala je očigledan negativan efekat na površinu pika. U svetlu
eksperimentalnih nalaza, optimalna CAD detekcija diklofenaka, tramadola, kalijuma i hlora
postignuta je pri postavkama: konstanta filtera 5 s, vrednost funkcije snage 0,8 i temperatura
isparavanja 35ºC.",
publisher = "Savez farmaceutskih udruženja Srbije (SFUS)",
journal = "Arhiv za farmaciju",
title = "Influence of charged aerosol detector parameters on the response of chosen analytes in the mixed‐mode chromatography system, Uticaj parametara detektora naelektirsanja u aerosolu na odgovore odabranih analita u sistemu multimodalne hromatografije",
volume = "71",
number = "5 suplement",
pages = "S122-S123",
url = "https://hdl.handle.net/21.15107/rcub_farfar_4679"
}
Krmar, J., Svrkota, B., Đajić, N., Protić, A.,& Otašević, B.. (2021). Influence of charged aerosol detector parameters on the response of chosen analytes in the mixed‐mode chromatography system. in Arhiv za farmaciju
Savez farmaceutskih udruženja Srbije (SFUS)., 71(5 suplement), S122-S123.
https://hdl.handle.net/21.15107/rcub_farfar_4679
Krmar J, Svrkota B, Đajić N, Protić A, Otašević B. Influence of charged aerosol detector parameters on the response of chosen analytes in the mixed‐mode chromatography system. in Arhiv za farmaciju. 2021;71(5 suplement):S122-S123.
https://hdl.handle.net/21.15107/rcub_farfar_4679 .
Krmar, Jovana, Svrkota, Bojana, Đajić, Nevena, Protić, Ana, Otašević, Biljana, "Influence of charged aerosol detector parameters on the response of chosen analytes in the mixed‐mode chromatography system" in Arhiv za farmaciju, 71, no. 5 suplement (2021):S122-S123,
https://hdl.handle.net/21.15107/rcub_farfar_4679 .

New strategies in the development of ecologically friendly RP‐HPLC methods based on the charged aerosol detector

Otašević, Biljana; Đajić, Nevena; Golubović, Jelena; Krmar, Jovana; Protić, Ana

(Savez farmaceutskih udruženja Srbije (SFUS), 2021)

TY  - CONF
AU  - Otašević, Biljana
AU  - Đajić, Nevena
AU  - Golubović, Jelena
AU  - Krmar, Jovana
AU  - Protić, Ana
PY  - 2021
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4667
AB  - Qualitative and quantitative assessment of drug substances and drug dosage forms is of utmost
importance for the quality control in pharmaceutical industry. Among the analytical techniques
available, high performance liquid chromatography (HPLC) stands out due to its high efficiency and
robustness. But, HPLC is also characterized by high consumption of toxic organic solvents used both for
method development and routine analyses. These solvents could harmfully impact the environment
and human health. Therefore, various strategies are developing for attracting eco-friendly character to
HPLC. Recently introduced green chromatography concept is based on the 3R rule (Reduce – Replace –
Recycle) implying the HPLC method development governed by the decreased use of acetonitrile labeled
as the most commonly used HPLC solvent and its replacement with ethanol or acetone (1). However,
these greener alternatives are known for their high UV absorbtion cut-off values making them
unsuitable for common UV/VIS detection. As appropriate solvent compatible solution, the use of
Corona Charged Aerosol Detector (CAD) is proposed. CAD is recognized as a universal detector
providing persistent mass sensitive analyte response independent of chemical structure (no need for
UV/VIS chromofores or ionization ability). The detection principle involves the nebulization of
chromatographic mobile phase, the evaporation of aerosol droplets and finally the production of
charged analyte particles (2). Assuming that chromatographic behavior and CAD generated responses
of analytes could be affected by various mobile phase related factors and/or detector parameters
settings, design of experiments (DoE) supported HPLC-CAD method development was performed for
the analysis of antipsychotic drug risperidone in presence of its impurities. By carefully planning the
number and the order of performing experiments, DoE methodology enables investigation of
significance effects of multiple factor effects together with their factor interactions. Different
experimental settings involving variation of organic solvent type and content in range 15-25% (V/V),
mobile phase flow rate (0.50-1.00 mL min -1) and column temperature (25-50 °C) were examined in
accordance with Box-Behnken design and selectivity factor between adjacent peaks on the
chromatogram was measured. The optimal conditions were defined applying mucticriteria decision
making approach by means of Derringer desirability function evaluation. Optimal separations were
achieved using 20% (V/V) of ethanol in mobile phase flowing at 0.6 mL min -1 under 37.5 °C column
temperature, while in case of acetone, optimum comprised 17% (V/V) of organic modifier, 0.8 mL min -1
and 37.5 °C. Finally, eco-friendly character of both methods was rated by Green Analytical Procedure
Index, GAPI (3).
AB  - Kvalitativna i kvantitativna analiza farmaceutskih supstanci i doziranih oblika predstavlja
činioce od najvećeg značaja za kontrolu kvaliteta u farmaceutskoj industriji. Među dostupnim
analitičkim tehnikama, tečna hromatografija pod visokim pritiskom (HPLC) ističe se svojom visokom
efikasnošć u i robusnošću. Ali, HPLC takođe karakteriše velika potrošnja toksičnih organskih rastvarača
koji se koriste za razvoj metoda i za rutinsku analizu lekova. Ovi rastvarači mogu štetno uticati i na
životnu sredinu i na zdravlje ljudi. Zbog toga se razvijaju različite strategije za obezbeđivanje ekološki
prihvatljivog karaktera HPLC metode. Nedavno predstavljeni koncept zelene hromatografije zasnovan
je na pravilu 3 R (Smanji - Zameni - Recikliraj), što podrazumeva razvoj HPLC metode koji se rukovodi
smanjenom upotrebom acetonitrila kao najčešće korišć enog rastvarača i njegovu zamenu etanolom ili
acetonom (1). Međutim, ove zelenije alternative poznate su po visokim vrednostima za UV apsorpciju,
što ih čini neprikladnim za uobičajenu UV/VIS detekciju. Kao odgovarajuće rešenje kompatibilno sa
pomenutim rastvaračima, predlaže se upotreba detektora naelektrisanja u aerosolu (CAD). CAD je
prepoznat kao univerzalni detektor koji pruža postojan odgovor zavistan od mase analita, a nezavisan
od hemijske strukture (postojanje UV/VIS hromofora ili sposobnosti jonizacije). Princip CAD detekcije
uključuje raspršivanje hromatografske mobilne faze u vidu kapljica aerosola, njihovo isparavanje i
konačno naelektrisavanje dobijenih čestica analita (2). Pretpostavljajuć i da na hromatografsko
ponašanje i CAD generisane odgovore analita mogu uticati različiti faktori povezani sa mobilnom fazom
i/ili parametrima podešavanja detektora, izvršen je razvoj HPLC-CAD metode za analizu antipsihotika
risperidona u prisustvu njegovih nečistoća uz podršku metodologije dizajna eksperimenata (DoE).
Pažljivim planiranjem broja i redosleda izvođenja eksperimenata, DoE omoguć ava ispitivanje značaja
efekata više faktora istovremeno zajedno sa njihovim faktorskim interakcijama. Različite
eksperimentalne postavke koje uključuju varijacije tipa i sadržaja organskog rastvarača u opsegu 15-
25% (V/V), protok mobilne faze (0,50-1,00 mL min -1) i temperaturu kolone (25-50 °C) ispitivane su u
skladu sa Boks-Behnken-ovim dizajnom i faktor selektivnosti između susednih vrhova na
hromatogramu je praćen. Optimalni uslovi definisani su primenom pristupa mutikriterijumskog
odlučivanja baziranog na izračunavanju Derringer-ove funkcije poželjnosti. Optimalna separacija je
postignuta primenom 20% (V/V) etanola u mobilnoj fazi koja teče pri 0,6 mL min -1 i pri temperaturi
kolone od 37,5 °C, dok je u slučaju acetona optimum podrazumevao 17% (V/V) organskog
modifikatora, protok 0,8 mL min -1 i temperaturu 37,5 °C. Konačno, ekološki karakter obe metode
procenjen je na osnovu indeksa zelenih analitičkih procedura, GAPI (3).
PB  - Savez farmaceutskih udruženja Srbije (SFUS)
C3  - Arhiv za farmaciju
T1  - New strategies in the development of ecologically friendly RP‐HPLC methods based on the charged aerosol detector
T1  - Nove strategije u razvoju ekološki prihvatljivih RP‐HPLC metoda primenom detektora naelektrisanja u aerosolu
VL  - 71
IS  - 5 suplement
SP  - S24
EP  - S25
UR  - https://hdl.handle.net/21.15107/rcub_farfar_4667
ER  - 
@conference{
author = "Otašević, Biljana and Đajić, Nevena and Golubović, Jelena and Krmar, Jovana and Protić, Ana",
year = "2021",
abstract = "Qualitative and quantitative assessment of drug substances and drug dosage forms is of utmost
importance for the quality control in pharmaceutical industry. Among the analytical techniques
available, high performance liquid chromatography (HPLC) stands out due to its high efficiency and
robustness. But, HPLC is also characterized by high consumption of toxic organic solvents used both for
method development and routine analyses. These solvents could harmfully impact the environment
and human health. Therefore, various strategies are developing for attracting eco-friendly character to
HPLC. Recently introduced green chromatography concept is based on the 3R rule (Reduce – Replace –
Recycle) implying the HPLC method development governed by the decreased use of acetonitrile labeled
as the most commonly used HPLC solvent and its replacement with ethanol or acetone (1). However,
these greener alternatives are known for their high UV absorbtion cut-off values making them
unsuitable for common UV/VIS detection. As appropriate solvent compatible solution, the use of
Corona Charged Aerosol Detector (CAD) is proposed. CAD is recognized as a universal detector
providing persistent mass sensitive analyte response independent of chemical structure (no need for
UV/VIS chromofores or ionization ability). The detection principle involves the nebulization of
chromatographic mobile phase, the evaporation of aerosol droplets and finally the production of
charged analyte particles (2). Assuming that chromatographic behavior and CAD generated responses
of analytes could be affected by various mobile phase related factors and/or detector parameters
settings, design of experiments (DoE) supported HPLC-CAD method development was performed for
the analysis of antipsychotic drug risperidone in presence of its impurities. By carefully planning the
number and the order of performing experiments, DoE methodology enables investigation of
significance effects of multiple factor effects together with their factor interactions. Different
experimental settings involving variation of organic solvent type and content in range 15-25% (V/V),
mobile phase flow rate (0.50-1.00 mL min -1) and column temperature (25-50 °C) were examined in
accordance with Box-Behnken design and selectivity factor between adjacent peaks on the
chromatogram was measured. The optimal conditions were defined applying mucticriteria decision
making approach by means of Derringer desirability function evaluation. Optimal separations were
achieved using 20% (V/V) of ethanol in mobile phase flowing at 0.6 mL min -1 under 37.5 °C column
temperature, while in case of acetone, optimum comprised 17% (V/V) of organic modifier, 0.8 mL min -1
and 37.5 °C. Finally, eco-friendly character of both methods was rated by Green Analytical Procedure
Index, GAPI (3)., Kvalitativna i kvantitativna analiza farmaceutskih supstanci i doziranih oblika predstavlja
činioce od najvećeg značaja za kontrolu kvaliteta u farmaceutskoj industriji. Među dostupnim
analitičkim tehnikama, tečna hromatografija pod visokim pritiskom (HPLC) ističe se svojom visokom
efikasnošć u i robusnošću. Ali, HPLC takođe karakteriše velika potrošnja toksičnih organskih rastvarača
koji se koriste za razvoj metoda i za rutinsku analizu lekova. Ovi rastvarači mogu štetno uticati i na
životnu sredinu i na zdravlje ljudi. Zbog toga se razvijaju različite strategije za obezbeđivanje ekološki
prihvatljivog karaktera HPLC metode. Nedavno predstavljeni koncept zelene hromatografije zasnovan
je na pravilu 3 R (Smanji - Zameni - Recikliraj), što podrazumeva razvoj HPLC metode koji se rukovodi
smanjenom upotrebom acetonitrila kao najčešće korišć enog rastvarača i njegovu zamenu etanolom ili
acetonom (1). Međutim, ove zelenije alternative poznate su po visokim vrednostima za UV apsorpciju,
što ih čini neprikladnim za uobičajenu UV/VIS detekciju. Kao odgovarajuće rešenje kompatibilno sa
pomenutim rastvaračima, predlaže se upotreba detektora naelektrisanja u aerosolu (CAD). CAD je
prepoznat kao univerzalni detektor koji pruža postojan odgovor zavistan od mase analita, a nezavisan
od hemijske strukture (postojanje UV/VIS hromofora ili sposobnosti jonizacije). Princip CAD detekcije
uključuje raspršivanje hromatografske mobilne faze u vidu kapljica aerosola, njihovo isparavanje i
konačno naelektrisavanje dobijenih čestica analita (2). Pretpostavljajuć i da na hromatografsko
ponašanje i CAD generisane odgovore analita mogu uticati različiti faktori povezani sa mobilnom fazom
i/ili parametrima podešavanja detektora, izvršen je razvoj HPLC-CAD metode za analizu antipsihotika
risperidona u prisustvu njegovih nečistoća uz podršku metodologije dizajna eksperimenata (DoE).
Pažljivim planiranjem broja i redosleda izvođenja eksperimenata, DoE omoguć ava ispitivanje značaja
efekata više faktora istovremeno zajedno sa njihovim faktorskim interakcijama. Različite
eksperimentalne postavke koje uključuju varijacije tipa i sadržaja organskog rastvarača u opsegu 15-
25% (V/V), protok mobilne faze (0,50-1,00 mL min -1) i temperaturu kolone (25-50 °C) ispitivane su u
skladu sa Boks-Behnken-ovim dizajnom i faktor selektivnosti između susednih vrhova na
hromatogramu je praćen. Optimalni uslovi definisani su primenom pristupa mutikriterijumskog
odlučivanja baziranog na izračunavanju Derringer-ove funkcije poželjnosti. Optimalna separacija je
postignuta primenom 20% (V/V) etanola u mobilnoj fazi koja teče pri 0,6 mL min -1 i pri temperaturi
kolone od 37,5 °C, dok je u slučaju acetona optimum podrazumevao 17% (V/V) organskog
modifikatora, protok 0,8 mL min -1 i temperaturu 37,5 °C. Konačno, ekološki karakter obe metode
procenjen je na osnovu indeksa zelenih analitičkih procedura, GAPI (3).",
publisher = "Savez farmaceutskih udruženja Srbije (SFUS)",
journal = "Arhiv za farmaciju",
title = "New strategies in the development of ecologically friendly RP‐HPLC methods based on the charged aerosol detector, Nove strategije u razvoju ekološki prihvatljivih RP‐HPLC metoda primenom detektora naelektrisanja u aerosolu",
volume = "71",
number = "5 suplement",
pages = "S24-S25",
url = "https://hdl.handle.net/21.15107/rcub_farfar_4667"
}
Otašević, B., Đajić, N., Golubović, J., Krmar, J.,& Protić, A.. (2021). New strategies in the development of ecologically friendly RP‐HPLC methods based on the charged aerosol detector. in Arhiv za farmaciju
Savez farmaceutskih udruženja Srbije (SFUS)., 71(5 suplement), S24-S25.
https://hdl.handle.net/21.15107/rcub_farfar_4667
Otašević B, Đajić N, Golubović J, Krmar J, Protić A. New strategies in the development of ecologically friendly RP‐HPLC methods based on the charged aerosol detector. in Arhiv za farmaciju. 2021;71(5 suplement):S24-S25.
https://hdl.handle.net/21.15107/rcub_farfar_4667 .
Otašević, Biljana, Đajić, Nevena, Golubović, Jelena, Krmar, Jovana, Protić, Ana, "New strategies in the development of ecologically friendly RP‐HPLC methods based on the charged aerosol detector" in Arhiv za farmaciju, 71, no. 5 suplement (2021):S24-S25,
https://hdl.handle.net/21.15107/rcub_farfar_4667 .

Charged aerosol detector response modeling for fatty acids based on experimental settings and molecular features: a machine learning approach

Pawellek, Ruben; Krmar, Jovana; Leistner, Adrian; Đajić, Nevena; Otašević, Biljana; Protić, Ana; Holzgrabe, Ulrike

(BioMed Central Ltd, 2021)

TY  - JOUR
AU  - Pawellek, Ruben
AU  - Krmar, Jovana
AU  - Leistner, Adrian
AU  - Đajić, Nevena
AU  - Otašević, Biljana
AU  - Protić, Ana
AU  - Holzgrabe, Ulrike
PY  - 2021
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/3926
AB  - The charged aerosol detector (CAD) is the latest representative of aerosol-based detectors that generate a response  independent of the analytes’ chemical structure. This study was aimed at accurately predicting the CAD response  of homologous fatty acids under varying experimental conditions. Fatty acids from C12 to C18 were used as model  substances due to semivolatile characterics that caused non-uniform CAD behaviour. Considering both experimental  conditions and molecular descriptors, a mixed quantitative structure–property relationship (QSPR) modeling was  performed using Gradient Boosted Trees (GBT ). The ensemble of 10 decisions trees (learning rate set at 0.55, the  maximal depth set at 5, and the sample rate set at 1.0) was able to explain approximately 99%  (Q2: 0.987, RMSE: 0.051)  of the observed variance in CAD responses. Validation using an external test compound confirmed the high predic- tive ability of the model established  (R2: 0.990, RMSEP: 0.050). With respect to the intrinsic attribute selection strategy,  GBT used almost all independent variables during model building. Finally, it attributed the highest importance to  the power function value, the flow rate of the mobile phase, evaporation temperature, the content of the organic  solvent in the mobile phase and the molecular descriptors such as molecular weight (MW ), Radial Distribution Func- tion—080/weighted by mass (RDF080m) and average coefficient of the last eigenvector from distance/detour matrix  (Ve2_D/Dt). The identification of the factors most relevant to the CAD responsiveness has contributed to a better  understanding of the underlying mechanisms of signal generation. An increased CAD response that was obtained for  acetone as organic modifier demonstrated its potential to replace the more expensive and environmentally harmful  acetonitrile.
PB  - BioMed Central Ltd
T2  - Journal of Cheminformatics
T1  - Charged aerosol detector response modeling for fatty acids based on experimental settings and molecular features: a machine learning approach
VL  - 13
IS  - 1
DO  - 10.1186/s13321-021-00532-0
ER  - 
@article{
author = "Pawellek, Ruben and Krmar, Jovana and Leistner, Adrian and Đajić, Nevena and Otašević, Biljana and Protić, Ana and Holzgrabe, Ulrike",
year = "2021",
abstract = "The charged aerosol detector (CAD) is the latest representative of aerosol-based detectors that generate a response  independent of the analytes’ chemical structure. This study was aimed at accurately predicting the CAD response  of homologous fatty acids under varying experimental conditions. Fatty acids from C12 to C18 were used as model  substances due to semivolatile characterics that caused non-uniform CAD behaviour. Considering both experimental  conditions and molecular descriptors, a mixed quantitative structure–property relationship (QSPR) modeling was  performed using Gradient Boosted Trees (GBT ). The ensemble of 10 decisions trees (learning rate set at 0.55, the  maximal depth set at 5, and the sample rate set at 1.0) was able to explain approximately 99%  (Q2: 0.987, RMSE: 0.051)  of the observed variance in CAD responses. Validation using an external test compound confirmed the high predic- tive ability of the model established  (R2: 0.990, RMSEP: 0.050). With respect to the intrinsic attribute selection strategy,  GBT used almost all independent variables during model building. Finally, it attributed the highest importance to  the power function value, the flow rate of the mobile phase, evaporation temperature, the content of the organic  solvent in the mobile phase and the molecular descriptors such as molecular weight (MW ), Radial Distribution Func- tion—080/weighted by mass (RDF080m) and average coefficient of the last eigenvector from distance/detour matrix  (Ve2_D/Dt). The identification of the factors most relevant to the CAD responsiveness has contributed to a better  understanding of the underlying mechanisms of signal generation. An increased CAD response that was obtained for  acetone as organic modifier demonstrated its potential to replace the more expensive and environmentally harmful  acetonitrile.",
publisher = "BioMed Central Ltd",
journal = "Journal of Cheminformatics",
title = "Charged aerosol detector response modeling for fatty acids based on experimental settings and molecular features: a machine learning approach",
volume = "13",
number = "1",
doi = "10.1186/s13321-021-00532-0"
}
Pawellek, R., Krmar, J., Leistner, A., Đajić, N., Otašević, B., Protić, A.,& Holzgrabe, U.. (2021). Charged aerosol detector response modeling for fatty acids based on experimental settings and molecular features: a machine learning approach. in Journal of Cheminformatics
BioMed Central Ltd., 13(1).
https://doi.org/10.1186/s13321-021-00532-0
Pawellek R, Krmar J, Leistner A, Đajić N, Otašević B, Protić A, Holzgrabe U. Charged aerosol detector response modeling for fatty acids based on experimental settings and molecular features: a machine learning approach. in Journal of Cheminformatics. 2021;13(1).
doi:10.1186/s13321-021-00532-0 .
Pawellek, Ruben, Krmar, Jovana, Leistner, Adrian, Đajić, Nevena, Otašević, Biljana, Protić, Ana, Holzgrabe, Ulrike, "Charged aerosol detector response modeling for fatty acids based on experimental settings and molecular features: a machine learning approach" in Journal of Cheminformatics, 13, no. 1 (2021),
https://doi.org/10.1186/s13321-021-00532-0 . .
8
10
8

Corona Charged Aerosol Detector in studying retention and β-cyclodextrin complex stability using RP-HPLC

Đajić, Nevena; Otašević, Biljana; Malenović, Anđelija; Zečević, Mira; Holzgrabe, Ulrike; Protić, Ana

(Elsevier B.V., 2021)

TY  - JOUR
AU  - Đajić, Nevena
AU  - Otašević, Biljana
AU  - Malenović, Anđelija
AU  - Zečević, Mira
AU  - Holzgrabe, Ulrike
AU  - Protić, Ana
PY  - 2021
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/3728
AB  - Binding between cyclodextrin (CD) cavity and guest molecule in Reversed Phase High-Performance Liquid Chromatography (RP-HPLC) is dynamic process. In general, increasing CD concentration is inducing inclusion complex formation, leading to reduction of analyte's retention time. Consequently, the shortness in retention time is a measure of complex stability in HPLC. However, under certain experimental conditions, the retention of some analytes could be prolonged even when concentration of CD in the mobile phase is increased. In order to reveal the cause of this unexpected retention behavior, the present study was carried on. The model mixture consisted of risperidone, olanzapine and their related impurities, while β-CD was selected among CDs, as in the previous study. In order to achieve fast equilibrium between free analyte and β-CD-analyte complex, β-CD was not added to the mobile phase, but only to the sample. Detection was performed with Corona Charged Aerosol Detector (CAD), suitable for non-chromophoric β-CD. When analyzing olanzapine impurity B-β-CD sample, three peaks were detected, namely free β-CD, β-CD-analyte complex and free analyte. The complex stability constant was calculated employing a modification of the Benesi-Hildebrandt equation and CAD has proven to be useful in complex stability constants assessment if retention of free analyte and β-CD-analyte complex is distinguished. For all other analytes only two peaks could be detected, because free analyte and formed complex are eluting at the same retention time. Under such circumstances, the authors proposed the methodology for calculating stability constants and confirmed its applicability to studied model mixture.
PB  - Elsevier B.V.
T2  - Journal of Pharmaceutical and Biomedical Analysis
T1  - Corona Charged Aerosol Detector in studying retention and β-cyclodextrin complex stability using RP-HPLC
VL  - 193
DO  - 10.1016/j.jpba.2020.113711
ER  - 
@article{
author = "Đajić, Nevena and Otašević, Biljana and Malenović, Anđelija and Zečević, Mira and Holzgrabe, Ulrike and Protić, Ana",
year = "2021",
abstract = "Binding between cyclodextrin (CD) cavity and guest molecule in Reversed Phase High-Performance Liquid Chromatography (RP-HPLC) is dynamic process. In general, increasing CD concentration is inducing inclusion complex formation, leading to reduction of analyte's retention time. Consequently, the shortness in retention time is a measure of complex stability in HPLC. However, under certain experimental conditions, the retention of some analytes could be prolonged even when concentration of CD in the mobile phase is increased. In order to reveal the cause of this unexpected retention behavior, the present study was carried on. The model mixture consisted of risperidone, olanzapine and their related impurities, while β-CD was selected among CDs, as in the previous study. In order to achieve fast equilibrium between free analyte and β-CD-analyte complex, β-CD was not added to the mobile phase, but only to the sample. Detection was performed with Corona Charged Aerosol Detector (CAD), suitable for non-chromophoric β-CD. When analyzing olanzapine impurity B-β-CD sample, three peaks were detected, namely free β-CD, β-CD-analyte complex and free analyte. The complex stability constant was calculated employing a modification of the Benesi-Hildebrandt equation and CAD has proven to be useful in complex stability constants assessment if retention of free analyte and β-CD-analyte complex is distinguished. For all other analytes only two peaks could be detected, because free analyte and formed complex are eluting at the same retention time. Under such circumstances, the authors proposed the methodology for calculating stability constants and confirmed its applicability to studied model mixture.",
publisher = "Elsevier B.V.",
journal = "Journal of Pharmaceutical and Biomedical Analysis",
title = "Corona Charged Aerosol Detector in studying retention and β-cyclodextrin complex stability using RP-HPLC",
volume = "193",
doi = "10.1016/j.jpba.2020.113711"
}
Đajić, N., Otašević, B., Malenović, A., Zečević, M., Holzgrabe, U.,& Protić, A.. (2021). Corona Charged Aerosol Detector in studying retention and β-cyclodextrin complex stability using RP-HPLC. in Journal of Pharmaceutical and Biomedical Analysis
Elsevier B.V.., 193.
https://doi.org/10.1016/j.jpba.2020.113711
Đajić N, Otašević B, Malenović A, Zečević M, Holzgrabe U, Protić A. Corona Charged Aerosol Detector in studying retention and β-cyclodextrin complex stability using RP-HPLC. in Journal of Pharmaceutical and Biomedical Analysis. 2021;193.
doi:10.1016/j.jpba.2020.113711 .
Đajić, Nevena, Otašević, Biljana, Malenović, Anđelija, Zečević, Mira, Holzgrabe, Ulrike, Protić, Ana, "Corona Charged Aerosol Detector in studying retention and β-cyclodextrin complex stability using RP-HPLC" in Journal of Pharmaceutical and Biomedical Analysis, 193 (2021),
https://doi.org/10.1016/j.jpba.2020.113711 . .
1
1
1

Chemometrically Assisted RP-HPLC Method Development for Efficient Separation of Ivabradine and its Eleven Impurities

Tomić, Jovana; Ivković, Branka; Oljačić, Slavica; Nikolić, Katarina; Maljurić, Nevena; Protić, Ana; Agbaba, Danica

(Akademiai Kiado Zrt., 2020)

TY  - JOUR
AU  - Tomić, Jovana
AU  - Ivković, Branka
AU  - Oljačić, Slavica
AU  - Nikolić, Katarina
AU  - Maljurić, Nevena
AU  - Protić, Ana
AU  - Agbaba, Danica
PY  - 2020
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4903
AB  - The aim of this study was to develop a novel reversed-phase high-performance liquid chromatography (RP-HPLC)
method for efficient separation of ivabradine and its 11 impurities. Similar polarity of impurities in the sample mixture
made method optimization challenging and accomplishable only when different chemometric tools, such as
principal component analysis (PCA), Box–Behnken design (BBD), and desirability function as a multicriteria approach,
were employed. The presence of 3 positional isomers (impurities III, V, and VI), keto–enol tautomerism of
impurity VII, and diastereoisomers of impurity X made separation of this complex mixture even more challenging.
Chromatographic retention parameters obtained with the mobile phase consisting of 30 mM phosphate buffer and
acetonitrile (80:20, v/v) on four different RP-HPLC columns at varying pH values (3.0, 4.0, and 5.0) were subjected
to the PCA analysis to select the column with the most appropriate selectivity. Then the column temperature,
pH of the aqueous component of mobile phase, phosphate buffer molarity and the organic solvent content in the
mobile phase were estimated employing BBD. Valid and reliable mathematical models towards resolution of twelve
critical peak pairs were obtained. After determination of the desirability making criteria for all responses, desirability
functions were established and used in optimization. The proposed optimal chromatographic conditions included
the Zorbax Eclipse Plus C18 chromatographic column (100 × 4.6 mm, 3.5 μm), the column temperature of 34 °C,
the mobile phase flow rate of 1.6 mL min−1 and the UV detection at 220 nm. The mobile phase consisted of the
28 mM phosphate buffer at pH 6.0 and acetonitrile (85:15, v/v). Separation of one pair of positional isomers was
not achieved, so methanol was added to the organic part of mobile phase in small increments with the optimal ratio
of methanol to acetonitrile 59:41, v/v. The overall organic component of the mobile phase also increased to 18%,
accelerating the chromatographic analysis.
PB  - Akademiai Kiado Zrt.
T2  - Acta Chromatographica
T1  - Chemometrically Assisted RP-HPLC Method Development for Efficient Separation of Ivabradine and its Eleven Impurities
VL  - 32
IS  - 1
SP  - 53
EP  - 63
DO  - 10.1556/1326.2019.00659
ER  - 
@article{
author = "Tomić, Jovana and Ivković, Branka and Oljačić, Slavica and Nikolić, Katarina and Maljurić, Nevena and Protić, Ana and Agbaba, Danica",
year = "2020",
abstract = "The aim of this study was to develop a novel reversed-phase high-performance liquid chromatography (RP-HPLC)
method for efficient separation of ivabradine and its 11 impurities. Similar polarity of impurities in the sample mixture
made method optimization challenging and accomplishable only when different chemometric tools, such as
principal component analysis (PCA), Box–Behnken design (BBD), and desirability function as a multicriteria approach,
were employed. The presence of 3 positional isomers (impurities III, V, and VI), keto–enol tautomerism of
impurity VII, and diastereoisomers of impurity X made separation of this complex mixture even more challenging.
Chromatographic retention parameters obtained with the mobile phase consisting of 30 mM phosphate buffer and
acetonitrile (80:20, v/v) on four different RP-HPLC columns at varying pH values (3.0, 4.0, and 5.0) were subjected
to the PCA analysis to select the column with the most appropriate selectivity. Then the column temperature,
pH of the aqueous component of mobile phase, phosphate buffer molarity and the organic solvent content in the
mobile phase were estimated employing BBD. Valid and reliable mathematical models towards resolution of twelve
critical peak pairs were obtained. After determination of the desirability making criteria for all responses, desirability
functions were established and used in optimization. The proposed optimal chromatographic conditions included
the Zorbax Eclipse Plus C18 chromatographic column (100 × 4.6 mm, 3.5 μm), the column temperature of 34 °C,
the mobile phase flow rate of 1.6 mL min−1 and the UV detection at 220 nm. The mobile phase consisted of the
28 mM phosphate buffer at pH 6.0 and acetonitrile (85:15, v/v). Separation of one pair of positional isomers was
not achieved, so methanol was added to the organic part of mobile phase in small increments with the optimal ratio
of methanol to acetonitrile 59:41, v/v. The overall organic component of the mobile phase also increased to 18%,
accelerating the chromatographic analysis.",
publisher = "Akademiai Kiado Zrt.",
journal = "Acta Chromatographica",
title = "Chemometrically Assisted RP-HPLC Method Development for Efficient Separation of Ivabradine and its Eleven Impurities",
volume = "32",
number = "1",
pages = "53-63",
doi = "10.1556/1326.2019.00659"
}
Tomić, J., Ivković, B., Oljačić, S., Nikolić, K., Maljurić, N., Protić, A.,& Agbaba, D.. (2020). Chemometrically Assisted RP-HPLC Method Development for Efficient Separation of Ivabradine and its Eleven Impurities. in Acta Chromatographica
Akademiai Kiado Zrt.., 32(1), 53-63.
https://doi.org/10.1556/1326.2019.00659
Tomić J, Ivković B, Oljačić S, Nikolić K, Maljurić N, Protić A, Agbaba D. Chemometrically Assisted RP-HPLC Method Development for Efficient Separation of Ivabradine and its Eleven Impurities. in Acta Chromatographica. 2020;32(1):53-63.
doi:10.1556/1326.2019.00659 .
Tomić, Jovana, Ivković, Branka, Oljačić, Slavica, Nikolić, Katarina, Maljurić, Nevena, Protić, Ana, Agbaba, Danica, "Chemometrically Assisted RP-HPLC Method Development for Efficient Separation of Ivabradine and its Eleven Impurities" in Acta Chromatographica, 32, no. 1 (2020):53-63,
https://doi.org/10.1556/1326.2019.00659 . .
7
1
6

Chromatographic and computational lipophilicity assessment of novel antibiofilm agents

Krmar, Jovana; Protić, Ana; Đajić, Nevena; Zečević, Mira; Otašević, Biljana

(Taylor & Francis Inc., 2020)

TY  - JOUR
AU  - Krmar, Jovana
AU  - Protić, Ana
AU  - Đajić, Nevena
AU  - Zečević, Mira
AU  - Otašević, Biljana
PY  - 2020
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4902
AB  - In this study, lipophilicity of five newly designed molecules with antibiofilm properties was estimated
for the first time. The overall goal of lipophilicity evaluation in lead generation phase is to
decrease the traditionally high attrition rates for compounds entering clinical trials. Lipophilicity
was assessed using RP-HPLC and in silico methods. Chromatographic analyses were performed on
BDS Thermo Scientific Hypersil C18 and Phenomenex Kinetex C8 columns with mobile phase consisting
of acetonitrile and 20mmol/L ammonium-acetate solution in different ratios. Retention data
was used to derivatize the lipophilicity estimates logkw, S and u0: Computational substructurebased
and property-based methods were employed to calculate the logP, logD, milogP, AlogP,
XlogP2, XlogP3, AlogPs, AClogP and MlogP descriptors. Due to the incongruent trends of increasing
hydrophobicity observed among the scales, the Sum of Ranking Differences was used to fairly
evaluate the prediction ability of each method. This test unambiguously recognized SðC18Þ, AlogP
and XlogP2 as the best lipophilicity measures. By virtue of the respective scales, compound
denoted as DIRL PIP was identified as the most lipophilic one. Out of concern related to the DIRL
PIP’s anticipated toxicity, less hydrophobic MHK 9a should be subjected to the further drug development.
PB  - Taylor & Francis Inc.
T2  - Journal of Liquid Chromatography & Related Technologies
T1  - Chromatographic and computational lipophilicity assessment of novel antibiofilm agents
VL  - 43
IS  - 15-16
SP  - 615
EP  - 623
DO  - 10.1080/10826076.2020.1777154
ER  - 
@article{
author = "Krmar, Jovana and Protić, Ana and Đajić, Nevena and Zečević, Mira and Otašević, Biljana",
year = "2020",
abstract = "In this study, lipophilicity of five newly designed molecules with antibiofilm properties was estimated
for the first time. The overall goal of lipophilicity evaluation in lead generation phase is to
decrease the traditionally high attrition rates for compounds entering clinical trials. Lipophilicity
was assessed using RP-HPLC and in silico methods. Chromatographic analyses were performed on
BDS Thermo Scientific Hypersil C18 and Phenomenex Kinetex C8 columns with mobile phase consisting
of acetonitrile and 20mmol/L ammonium-acetate solution in different ratios. Retention data
was used to derivatize the lipophilicity estimates logkw, S and u0: Computational substructurebased
and property-based methods were employed to calculate the logP, logD, milogP, AlogP,
XlogP2, XlogP3, AlogPs, AClogP and MlogP descriptors. Due to the incongruent trends of increasing
hydrophobicity observed among the scales, the Sum of Ranking Differences was used to fairly
evaluate the prediction ability of each method. This test unambiguously recognized SðC18Þ, AlogP
and XlogP2 as the best lipophilicity measures. By virtue of the respective scales, compound
denoted as DIRL PIP was identified as the most lipophilic one. Out of concern related to the DIRL
PIP’s anticipated toxicity, less hydrophobic MHK 9a should be subjected to the further drug development.",
publisher = "Taylor & Francis Inc.",
journal = "Journal of Liquid Chromatography & Related Technologies",
title = "Chromatographic and computational lipophilicity assessment of novel antibiofilm agents",
volume = "43",
number = "15-16",
pages = "615-623",
doi = "10.1080/10826076.2020.1777154"
}
Krmar, J., Protić, A., Đajić, N., Zečević, M.,& Otašević, B.. (2020). Chromatographic and computational lipophilicity assessment of novel antibiofilm agents. in Journal of Liquid Chromatography & Related Technologies
Taylor & Francis Inc.., 43(15-16), 615-623.
https://doi.org/10.1080/10826076.2020.1777154
Krmar J, Protić A, Đajić N, Zečević M, Otašević B. Chromatographic and computational lipophilicity assessment of novel antibiofilm agents. in Journal of Liquid Chromatography & Related Technologies. 2020;43(15-16):615-623.
doi:10.1080/10826076.2020.1777154 .
Krmar, Jovana, Protić, Ana, Đajić, Nevena, Zečević, Mira, Otašević, Biljana, "Chromatographic and computational lipophilicity assessment of novel antibiofilm agents" in Journal of Liquid Chromatography & Related Technologies, 43, no. 15-16 (2020):615-623,
https://doi.org/10.1080/10826076.2020.1777154 . .
1
2

Molecular docking study on biomolecules isolated from endophytic fungi

Ignjatović, Janko; Đajić, Nevena; Krmar, Jovana; Protić, Ana; Štrukelj, Borut; Otašević, Biljana

(Serbian Chemical Society, 2020)

TY  - JOUR
AU  - Ignjatović, Janko
AU  - Đajić, Nevena
AU  - Krmar, Jovana
AU  - Protić, Ana
AU  - Štrukelj, Borut
AU  - Otašević, Biljana
PY  - 2020
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/3797
AB  - Recently, growing interest has been devoted to the investigation of compounds with antimicrobial activity due to rising cases of resistance of mic-robes to known therapies. A reliable and versatile source of novel drug disco-very was recently found among endophytic fungi. Hitherto, the research usu-ally  enclosed  the in  vitro  evaluation  of  antimicrobial  activity  and  chemical structure  elucidation  of  biomolecules  extracted  from  fungal  material.  There-fore, this research was designed as an extension to previous investigations of endophytic fungi growing on conifer needles by means of conducting a mole-cular docking study. The in  silico methods were used with the main goal to make a contribution to the understanding of the  mechanisms underlying the interaction of biomolecules isolated from fungus Phomopsis  species and eight different types of receptors that belong to usually multidrug resistant bacterial pathogens.  The  results  revealed  valuable  interactions  with  receptors  3G7B (Staphylococcus  aureus’s  gyrase  B),  1F0K  (1.9  Å  structure  of Escherichia coli’s  transferase)  and  1SHV  (Klebsiella  pneumoniae’s  SHV-1 β-lactamase) thus pointing out the receptors that trigger antibiotic response upon activation by  the  most  potent  compounds  325-3,  325-5,  phomoenamide  and  phomol. These findings also recommended further discovery of novel potent and broad-spectrum antibiotics based on the structure of selected molecules.
AB  - У последње време, као одговорна повећање резистенције микроорганизама на познату терапију, све већа пажња се поклања истраживању једињења са антимикробном активношћу. Ендофитне гљиве су недавно представљене као поуздан и богат извор за развој нових лекова. До сада, истраживања су се углавном ограничавала на in vitro процену антимикробне активности и разоткривање хемијске структуре биомолекула изолованих из материјала гљива. Из тог разлога, ово истраживање је осмишљено као проширење претходно спроведених испитивања ендофита које расту на иглицама четинара путем in silico студије молекулског докинга. Главни циљ употребе in silico метода је био да се направи прилог разумевању механизама који стоје иза интеракције биомолекула изолованих из гљиве Phomopsis  species са осам различитих типова рецептора који припадају патогеним бактеријама у обичајеном ултирезистентних на лекове. Резултати су указали на важне интеракције са рецепторима  3G7B  (Staphylococcus  aureus гиразаБ), 1F0K  (структура Escherichia  Coli трансферазе величине  1,9  Å)  и  1SHV  (SHV-1  β-лакта-маза Klebsiella pneumoniae) указујући на тај начин на рецепторе путем којих се започиње антибиотски одговор након активације најпотентнијим једињењима, 325-3, 325-5, фомо-енамидом и фомолом. Овим открићем се такође препоручује будући развој нових моћних антибиотика са широким спектром деловања базиран на структури изабраних молекула.
PB  - Serbian Chemical Society
T2  - Journal of the Serbian Chemical Society
T1  - Molecular docking study on biomolecules isolated from endophytic fungi
T1  - Студија молекулског докинга са биомолекулима изолованим из ендофитних гљива
VL  - 86
IS  - 2
SP  - 125
EP  - 137
DO  - 10.2298/JSC200815002I
ER  - 
@article{
author = "Ignjatović, Janko and Đajić, Nevena and Krmar, Jovana and Protić, Ana and Štrukelj, Borut and Otašević, Biljana",
year = "2020",
abstract = "Recently, growing interest has been devoted to the investigation of compounds with antimicrobial activity due to rising cases of resistance of mic-robes to known therapies. A reliable and versatile source of novel drug disco-very was recently found among endophytic fungi. Hitherto, the research usu-ally  enclosed  the in  vitro  evaluation  of  antimicrobial  activity  and  chemical structure  elucidation  of  biomolecules  extracted  from  fungal  material.  There-fore, this research was designed as an extension to previous investigations of endophytic fungi growing on conifer needles by means of conducting a mole-cular docking study. The in  silico methods were used with the main goal to make a contribution to the understanding of the  mechanisms underlying the interaction of biomolecules isolated from fungus Phomopsis  species and eight different types of receptors that belong to usually multidrug resistant bacterial pathogens.  The  results  revealed  valuable  interactions  with  receptors  3G7B (Staphylococcus  aureus’s  gyrase  B),  1F0K  (1.9  Å  structure  of Escherichia coli’s  transferase)  and  1SHV  (Klebsiella  pneumoniae’s  SHV-1 β-lactamase) thus pointing out the receptors that trigger antibiotic response upon activation by  the  most  potent  compounds  325-3,  325-5,  phomoenamide  and  phomol. These findings also recommended further discovery of novel potent and broad-spectrum antibiotics based on the structure of selected molecules., У последње време, као одговорна повећање резистенције микроорганизама на познату терапију, све већа пажња се поклања истраживању једињења са антимикробном активношћу. Ендофитне гљиве су недавно представљене као поуздан и богат извор за развој нових лекова. До сада, истраживања су се углавном ограничавала на in vitro процену антимикробне активности и разоткривање хемијске структуре биомолекула изолованих из материјала гљива. Из тог разлога, ово истраживање је осмишљено као проширење претходно спроведених испитивања ендофита које расту на иглицама четинара путем in silico студије молекулског докинга. Главни циљ употребе in silico метода је био да се направи прилог разумевању механизама који стоје иза интеракције биомолекула изолованих из гљиве Phomopsis  species са осам различитих типова рецептора који припадају патогеним бактеријама у обичајеном ултирезистентних на лекове. Резултати су указали на важне интеракције са рецепторима  3G7B  (Staphylococcus  aureus гиразаБ), 1F0K  (структура Escherichia  Coli трансферазе величине  1,9  Å)  и  1SHV  (SHV-1  β-лакта-маза Klebsiella pneumoniae) указујући на тај начин на рецепторе путем којих се започиње антибиотски одговор након активације најпотентнијим једињењима, 325-3, 325-5, фомо-енамидом и фомолом. Овим открићем се такође препоручује будући развој нових моћних антибиотика са широким спектром деловања базиран на структури изабраних молекула.",
publisher = "Serbian Chemical Society",
journal = "Journal of the Serbian Chemical Society",
title = "Molecular docking study on biomolecules isolated from endophytic fungi, Студија молекулског докинга са биомолекулима изолованим из ендофитних гљива",
volume = "86",
number = "2",
pages = "125-137",
doi = "10.2298/JSC200815002I"
}
Ignjatović, J., Đajić, N., Krmar, J., Protić, A., Štrukelj, B.,& Otašević, B.. (2020). Molecular docking study on biomolecules isolated from endophytic fungi. in Journal of the Serbian Chemical Society
Serbian Chemical Society., 86(2), 125-137.
https://doi.org/10.2298/JSC200815002I
Ignjatović J, Đajić N, Krmar J, Protić A, Štrukelj B, Otašević B. Molecular docking study on biomolecules isolated from endophytic fungi. in Journal of the Serbian Chemical Society. 2020;86(2):125-137.
doi:10.2298/JSC200815002I .
Ignjatović, Janko, Đajić, Nevena, Krmar, Jovana, Protić, Ana, Štrukelj, Borut, Otašević, Biljana, "Molecular docking study on biomolecules isolated from endophytic fungi" in Journal of the Serbian Chemical Society, 86, no. 2 (2020):125-137,
https://doi.org/10.2298/JSC200815002I . .
1

Chaotropic effect of trifluoroacetic and perchloric acid on β-cyclodextrininclusion complexation process with risperidone, olanzapine and their selected impuritiesN

Đajić, Nevena; Krmar, Jovana; Malenović, Anđelija; Otašević, Biljana; Protić, Ana

(Beograd: Savez farmaceutskih udruženja Srbije, 2020)

TY  - JOUR
AU  - Đajić, Nevena
AU  - Krmar, Jovana
AU  - Malenović, Anđelija
AU  - Otašević, Biljana
AU  - Protić, Ana
PY  - 2020
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/3772
AB  - Effective method development together with method`s eco-friendly character are gaining importance in drug analyses nowadays. One of the strategies often applied to improve the efficacy of separation methods, especially in the case of basic ionizable analytes is adding chaotropic salts into the mobile phases. Moreover, the development of the green liquid chromatography method could also be achieved with certain mobile phase additives such as cyclodextrin (CD). The study aims to investigate whether adding chaotropic agents could improve the complexation process by disrupting  the  analytes’  water  solvation  shell.  The  model  mixture  consisted  of  risperidone, olanzapine, and their related impurities. Method development was aided with experimental design methodology, while optimal separation conditions were selected using Derringer’s desirability function.  Mathematical  models  obtained  for  each  of  the  examined  responses  enabled  the explanation of the single and simultaneous influence of β-CD concentration, chaotropic agents type,  and  content,  as  well  as  the  content  of  acetonitrile  in  the  mobile  phase. Retention  factors appeared  to be  the  most  influenced  by  acetonitrile  content  in  the  mobile  phase.  The  type  of chaotropic  agent  as  well  as  its  concentration  lead  to  retention  prolongation,  but  if  acetonitrile content in the mobile phase is high, the effect of chaotropic agent becomes negligible. Interaction between analyte and β-CD are relatively weak in comparison to the interaction of analyte form with either chaotropic agent or acetonitrile. Interaction leading to complexation are outperformed by other analyte related interactions in this complicated system, so complexation based retention reduction is not fully exposed. However, increasing β-CD concentration shows a positive effect on the resolution between critical peak pairs. Optimal separation conditions were selected based on 3D plots of Derringer’s desirability function. For olanzapine and its impurity, they included the following: acetonitrile content 16% (v/v), trifluoroacetic acid as a chaotropic agent with 0.95% (v/v)  content,  and  9  mM  β-CD  concentration.  Further,  optimal  separation  conditions  for risperidone   and   its   impurity   were   25%   (v/v)   acetonitrile   content   in   the   mobile   phase, trifluoroacetic acid as chaotrope agent with 0.27% (v/v) content and 5mM β-CD concentration.
AB  - U novije vreme sve više pažnje se poklanja efikasnom razvoju metode uz istovremenu procenu njenih ekoloških karakteristika. Jedna of često primenjivanih strategija za razdvajanje baznih  jonizacionih  supstanci  jeste  dodatak  haotropnih  soli  u  mobilnu  fazu.  Sa  druge  strane, ekološki prihvatljiva metoda tečne hromatografije može se razviti dodatkom ciklodekstrini (CD) kao  aditiva  mobilne  faze. Cilj ovog  rada je  bio  da  se  istraži  mogućnost  dodatka  haotropnih agenasa u mobilnu fazu u kojoj se već nalaze CD. Na ovaj način moglo bi doći do narušavanja solvatacionog omotača oko analita, što bi ubrzalo proces kompleksiranja analita i CD. Model smeša se sastojala od risperidona, olanzapina i njihovih srodnih supstanci. Metoda je razvijana primenom  metodologije  eksperimentalnog  dizajna,  dok  su  optimalni  uslovi  birani  primenom Deringerove  funkcije  poželjnih  odgovora.  Matematički  modeli  koji  su  dobijeni  za  svaki posmatrani odgovor, omogućili su dase ispita pojedinačni i zajednički uticaj koncentracije β-CD, tipa i koncentracije haotropnog agensa, kao i količine acetontrila u mobilnoj fazi. Pokazalo se da najveći  uticaj  na  retencioni  faktor  ima  količina  acetonitrila  u  mobilnoj  fazi.  Povećanje koncentracije  haotropa  dovodi  do  produženja  retencionog  faktora,  ali  ukoliko  je  količina acetonitrila u mobilnoj fazi visoka efekat haotropa postaje zanemarljiv. Interakcija između analita i β-CD su slabe u poređenju sa interakcijama koje analit ostvaruje sa haotropnim  agensom  ili acetonitrilom,  te  proces  kompleksiranja  biva  prevaziđen  drugim  vrstama  interakcija  u  ovom komplikovanom   sistemu.   Iz   tog   razloga   smanjenje   retencionog   vremena   kao   posledica kompleksiranja ne dolazi do izražaja. Uočeno je i da povećanje koncentracije β-CD dovodila je do povećanja rezolucije kritičnih parova. Optimalni hromatografski uslovi odabrani su na osnovu 3D grafikona Deringerove funkcije poželjnih odgovora. Za razdvajanje olanzapina i njegove srodne  supstance,  optimalni  uslovi  su  obuhvatali  16%  acetonitrila,  0,95%  trifluorosirćetnu kiselinu kao haotropni agens i 9 mM β-CD. Optimalni uslovi u slučaju razdvajanja risperidona i njegove srodne supstance obuhvatali su 25% acetonitrila, 0,27% trifluorosirćetne kiseline i 5mM β-CD.
PB  - Beograd: Savez farmaceutskih udruženja Srbije
T2  - Arhiv za farmaciju
T1  - Chaotropic effect of trifluoroacetic and perchloric acid on β-cyclodextrininclusion complexation process with risperidone, olanzapine and their selected impuritiesN
T1  - Haotropni efekat trifluorosirćetne i perhlorne kiseline na formiranje inkluzionih kompleksa između β-ciklodekstrina irisperidona, olanzapinainjihovih srodnih supstanci
VL  - 70
IS  - 6
SP  - 360
EP  - 376
DO  - 10.5937/arhfarm70-28865
ER  - 
@article{
author = "Đajić, Nevena and Krmar, Jovana and Malenović, Anđelija and Otašević, Biljana and Protić, Ana",
year = "2020",
abstract = "Effective method development together with method`s eco-friendly character are gaining importance in drug analyses nowadays. One of the strategies often applied to improve the efficacy of separation methods, especially in the case of basic ionizable analytes is adding chaotropic salts into the mobile phases. Moreover, the development of the green liquid chromatography method could also be achieved with certain mobile phase additives such as cyclodextrin (CD). The study aims to investigate whether adding chaotropic agents could improve the complexation process by disrupting  the  analytes’  water  solvation  shell.  The  model  mixture  consisted  of  risperidone, olanzapine, and their related impurities. Method development was aided with experimental design methodology, while optimal separation conditions were selected using Derringer’s desirability function.  Mathematical  models  obtained  for  each  of  the  examined  responses  enabled  the explanation of the single and simultaneous influence of β-CD concentration, chaotropic agents type,  and  content,  as  well  as  the  content  of  acetonitrile  in  the  mobile  phase. Retention  factors appeared  to be  the  most  influenced  by  acetonitrile  content  in  the  mobile  phase.  The  type  of chaotropic  agent  as  well  as  its  concentration  lead  to  retention  prolongation,  but  if  acetonitrile content in the mobile phase is high, the effect of chaotropic agent becomes negligible. Interaction between analyte and β-CD are relatively weak in comparison to the interaction of analyte form with either chaotropic agent or acetonitrile. Interaction leading to complexation are outperformed by other analyte related interactions in this complicated system, so complexation based retention reduction is not fully exposed. However, increasing β-CD concentration shows a positive effect on the resolution between critical peak pairs. Optimal separation conditions were selected based on 3D plots of Derringer’s desirability function. For olanzapine and its impurity, they included the following: acetonitrile content 16% (v/v), trifluoroacetic acid as a chaotropic agent with 0.95% (v/v)  content,  and  9  mM  β-CD  concentration.  Further,  optimal  separation  conditions  for risperidone   and   its   impurity   were   25%   (v/v)   acetonitrile   content   in   the   mobile   phase, trifluoroacetic acid as chaotrope agent with 0.27% (v/v) content and 5mM β-CD concentration., U novije vreme sve više pažnje se poklanja efikasnom razvoju metode uz istovremenu procenu njenih ekoloških karakteristika. Jedna of često primenjivanih strategija za razdvajanje baznih  jonizacionih  supstanci  jeste  dodatak  haotropnih  soli  u  mobilnu  fazu.  Sa  druge  strane, ekološki prihvatljiva metoda tečne hromatografije može se razviti dodatkom ciklodekstrini (CD) kao  aditiva  mobilne  faze. Cilj ovog  rada je  bio  da  se  istraži  mogućnost  dodatka  haotropnih agenasa u mobilnu fazu u kojoj se već nalaze CD. Na ovaj način moglo bi doći do narušavanja solvatacionog omotača oko analita, što bi ubrzalo proces kompleksiranja analita i CD. Model smeša se sastojala od risperidona, olanzapina i njihovih srodnih supstanci. Metoda je razvijana primenom  metodologije  eksperimentalnog  dizajna,  dok  su  optimalni  uslovi  birani  primenom Deringerove  funkcije  poželjnih  odgovora.  Matematički  modeli  koji  su  dobijeni  za  svaki posmatrani odgovor, omogućili su dase ispita pojedinačni i zajednički uticaj koncentracije β-CD, tipa i koncentracije haotropnog agensa, kao i količine acetontrila u mobilnoj fazi. Pokazalo se da najveći  uticaj  na  retencioni  faktor  ima  količina  acetonitrila  u  mobilnoj  fazi.  Povećanje koncentracije  haotropa  dovodi  do  produženja  retencionog  faktora,  ali  ukoliko  je  količina acetonitrila u mobilnoj fazi visoka efekat haotropa postaje zanemarljiv. Interakcija između analita i β-CD su slabe u poređenju sa interakcijama koje analit ostvaruje sa haotropnim  agensom  ili acetonitrilom,  te  proces  kompleksiranja  biva  prevaziđen  drugim  vrstama  interakcija  u  ovom komplikovanom   sistemu.   Iz   tog   razloga   smanjenje   retencionog   vremena   kao   posledica kompleksiranja ne dolazi do izražaja. Uočeno je i da povećanje koncentracije β-CD dovodila je do povećanja rezolucije kritičnih parova. Optimalni hromatografski uslovi odabrani su na osnovu 3D grafikona Deringerove funkcije poželjnih odgovora. Za razdvajanje olanzapina i njegove srodne  supstance,  optimalni  uslovi  su  obuhvatali  16%  acetonitrila,  0,95%  trifluorosirćetnu kiselinu kao haotropni agens i 9 mM β-CD. Optimalni uslovi u slučaju razdvajanja risperidona i njegove srodne supstance obuhvatali su 25% acetonitrila, 0,27% trifluorosirćetne kiseline i 5mM β-CD.",
publisher = "Beograd: Savez farmaceutskih udruženja Srbije",
journal = "Arhiv za farmaciju",
title = "Chaotropic effect of trifluoroacetic and perchloric acid on β-cyclodextrininclusion complexation process with risperidone, olanzapine and their selected impuritiesN, Haotropni efekat trifluorosirćetne i perhlorne kiseline na formiranje inkluzionih kompleksa između β-ciklodekstrina irisperidona, olanzapinainjihovih srodnih supstanci",
volume = "70",
number = "6",
pages = "360-376",
doi = "10.5937/arhfarm70-28865"
}
Đajić, N., Krmar, J., Malenović, A., Otašević, B.,& Protić, A.. (2020). Chaotropic effect of trifluoroacetic and perchloric acid on β-cyclodextrininclusion complexation process with risperidone, olanzapine and their selected impuritiesN. in Arhiv za farmaciju
Beograd: Savez farmaceutskih udruženja Srbije., 70(6), 360-376.
https://doi.org/10.5937/arhfarm70-28865
Đajić N, Krmar J, Malenović A, Otašević B, Protić A. Chaotropic effect of trifluoroacetic and perchloric acid on β-cyclodextrininclusion complexation process with risperidone, olanzapine and their selected impuritiesN. in Arhiv za farmaciju. 2020;70(6):360-376.
doi:10.5937/arhfarm70-28865 .
Đajić, Nevena, Krmar, Jovana, Malenović, Anđelija, Otašević, Biljana, Protić, Ana, "Chaotropic effect of trifluoroacetic and perchloric acid on β-cyclodextrininclusion complexation process with risperidone, olanzapine and their selected impuritiesN" in Arhiv za farmaciju, 70, no. 6 (2020):360-376,
https://doi.org/10.5937/arhfarm70-28865 . .

Chemometric window to antimicrobial activity of biomolecules isolated from endophytic fungi

Otašević, Biljana; Krmar, Jovana; Đajić, Nevena; Ignjatović, Janko; Protić, Ana

(Pharmaceutical Association of Serbia, 2020)

TY  - JOUR
AU  - Otašević, Biljana
AU  - Krmar, Jovana
AU  - Đajić, Nevena
AU  - Ignjatović, Janko
AU  - Protić, Ana
PY  - 2020
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/3662
AB  - Drug resistance, especially bacterial antibiotic resistance, is recognized as a global phenomenon. Potential of endophytic fungi as producers of secondary metabolites with wide spectra of different bioactivities in the field of drug discovery has recently been introduced. The production of these compounds is under the great impact of the variety of factors related to the choice of plant host, climate conditions, nutrition, presence of other microorganisms in the same surrounding, etc. Due to a large number of different indices of endophytic fungi antibacterial activity, critical evaluation with the assistance of data mining analytical methods was performed. The activity towards several pathogen bacteria of endophytes species growing on different plant hosts, deciduous trees as well as herbaceous plants spread worldwide in different climatic zones together with the taxonomy of endophytes was taken into consideration. The principal component analysis was used to explore formed big data set and through finding patterns in data, to point out to a limited number of proper candidates for future pharmaceutical research. The antimicrobial character of Phomopsis species was highlighted and future perspectives in their therapeutic use were projected.
AB  - Rezistencija na lekove, posebno rezistencija bakterija na delovanje antibiotika, smatra se globalnim  problemom.  Na  polju  razvoja  novih  lekova  nedavno  su  se  pojavile  endofitne  gljive zahvaljujući  sposobnosti  da  proizvedu  sekundarne  metabolite  sa  širokim  spektrom  različitih bioloških aktivnosti. Biosinteza ovih jedinjenja je pod velikim uticajem brojnih faktora koji se vezuju za izbor biljke domaćina, klimatske uslove, ishranu, prisustvo drugih mikroorganizama u istom okruženju itd. Pošto je u literaturi primećen veliki broj različitih indikatora antibakterijske aktivnosti endofitnih gljiva, izvršena je njihova kritička procena korišćenjem analitičkih metoda pretrage  podataka.  Razmatrana je  aktivnost  prema  nekoliko  sojeva  patogenih  bakterija  koje  su pokazale  endofitne gljive koje rastu na različitim biljkama domaćinima, listopadnom drveću i zeljastim  biljkama  širom  sveta  i  u  različitim  klimatskim  uslovima,  kao  i  taksonomska rasprostranjenost  vrsta  endofitnih  gljiva. Istraživanje velike grupe podataka je vršeno pomoću analize  glavnih  komponenata  (eng. Principal  component  analysis)  sa  ciljem  pronalaženja obrazaca  u  podacima  koji  bi  ukazali  na  manji  broj  pravih  kandidata  za  dalji  razvoj  lekova. Osvetljen  je  antimikrobni  karakter Phomopsis vrsta, a takođe su procenjeni i budući pravci u njegovoj terapijskoj primeni.
PB  - Pharmaceutical Association of Serbia
T2  - Arhiv za farmaciju
T1  - Chemometric window to antimicrobial activity of biomolecules isolated from endophytic fungi
T1  - Hemometrijski prozor ka antibakterijskoj aktivnosti biomolekula izolovanih iz endofitnih gljiva
VL  - 70
IS  - 3
SP  - 142
EP  - 156
DO  - 10.5937/arhfarm2003142O
ER  - 
@article{
author = "Otašević, Biljana and Krmar, Jovana and Đajić, Nevena and Ignjatović, Janko and Protić, Ana",
year = "2020",
abstract = "Drug resistance, especially bacterial antibiotic resistance, is recognized as a global phenomenon. Potential of endophytic fungi as producers of secondary metabolites with wide spectra of different bioactivities in the field of drug discovery has recently been introduced. The production of these compounds is under the great impact of the variety of factors related to the choice of plant host, climate conditions, nutrition, presence of other microorganisms in the same surrounding, etc. Due to a large number of different indices of endophytic fungi antibacterial activity, critical evaluation with the assistance of data mining analytical methods was performed. The activity towards several pathogen bacteria of endophytes species growing on different plant hosts, deciduous trees as well as herbaceous plants spread worldwide in different climatic zones together with the taxonomy of endophytes was taken into consideration. The principal component analysis was used to explore formed big data set and through finding patterns in data, to point out to a limited number of proper candidates for future pharmaceutical research. The antimicrobial character of Phomopsis species was highlighted and future perspectives in their therapeutic use were projected., Rezistencija na lekove, posebno rezistencija bakterija na delovanje antibiotika, smatra se globalnim  problemom.  Na  polju  razvoja  novih  lekova  nedavno  su  se  pojavile  endofitne  gljive zahvaljujući  sposobnosti  da  proizvedu  sekundarne  metabolite  sa  širokim  spektrom  različitih bioloških aktivnosti. Biosinteza ovih jedinjenja je pod velikim uticajem brojnih faktora koji se vezuju za izbor biljke domaćina, klimatske uslove, ishranu, prisustvo drugih mikroorganizama u istom okruženju itd. Pošto je u literaturi primećen veliki broj različitih indikatora antibakterijske aktivnosti endofitnih gljiva, izvršena je njihova kritička procena korišćenjem analitičkih metoda pretrage  podataka.  Razmatrana je  aktivnost  prema  nekoliko  sojeva  patogenih  bakterija  koje  su pokazale  endofitne gljive koje rastu na različitim biljkama domaćinima, listopadnom drveću i zeljastim  biljkama  širom  sveta  i  u  različitim  klimatskim  uslovima,  kao  i  taksonomska rasprostranjenost  vrsta  endofitnih  gljiva. Istraživanje velike grupe podataka je vršeno pomoću analize  glavnih  komponenata  (eng. Principal  component  analysis)  sa  ciljem  pronalaženja obrazaca  u  podacima  koji  bi  ukazali  na  manji  broj  pravih  kandidata  za  dalji  razvoj  lekova. Osvetljen  je  antimikrobni  karakter Phomopsis vrsta, a takođe su procenjeni i budući pravci u njegovoj terapijskoj primeni.",
publisher = "Pharmaceutical Association of Serbia",
journal = "Arhiv za farmaciju",
title = "Chemometric window to antimicrobial activity of biomolecules isolated from endophytic fungi, Hemometrijski prozor ka antibakterijskoj aktivnosti biomolekula izolovanih iz endofitnih gljiva",
volume = "70",
number = "3",
pages = "142-156",
doi = "10.5937/arhfarm2003142O"
}
Otašević, B., Krmar, J., Đajić, N., Ignjatović, J.,& Protić, A.. (2020). Chemometric window to antimicrobial activity of biomolecules isolated from endophytic fungi. in Arhiv za farmaciju
Pharmaceutical Association of Serbia., 70(3), 142-156.
https://doi.org/10.5937/arhfarm2003142O
Otašević B, Krmar J, Đajić N, Ignjatović J, Protić A. Chemometric window to antimicrobial activity of biomolecules isolated from endophytic fungi. in Arhiv za farmaciju. 2020;70(3):142-156.
doi:10.5937/arhfarm2003142O .
Otašević, Biljana, Krmar, Jovana, Đajić, Nevena, Ignjatović, Janko, Protić, Ana, "Chemometric window to antimicrobial activity of biomolecules isolated from endophytic fungi" in Arhiv za farmaciju, 70, no. 3 (2020):142-156,
https://doi.org/10.5937/arhfarm2003142O . .

Significant molecular and complex association descriptors in QSRR modelling of Green Liquid Chromatography using β-cyclodextrin mobile phases

Protić, Ana; Maljurić, Nevena; Otašević, Biljana; Malenović, Anđelija; Zečević, Mira

(BIOSCOPE Research Group | PROTEOMASS Scientific Society, 2020)

TY  - CONF
AU  - Protić, Ana
AU  - Maljurić, Nevena
AU  - Otašević, Biljana
AU  - Malenović, Anđelija
AU  - Zečević, Mira
PY  - 2020
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4705
PB  - BIOSCOPE Research Group | PROTEOMASS Scientific Society
C3  - 4th International Caparica Christmas Conference on Sample Treatement, 30th November - 3rd December 2020, Caparica, Portugal (on-line), 2020.
T1  - Significant molecular and complex association descriptors in QSRR modelling of Green Liquid Chromatography using β-cyclodextrin mobile phases
SP  - 94
EP  - 94
UR  - https://hdl.handle.net/21.15107/rcub_farfar_4705
ER  - 
@conference{
author = "Protić, Ana and Maljurić, Nevena and Otašević, Biljana and Malenović, Anđelija and Zečević, Mira",
year = "2020",
publisher = "BIOSCOPE Research Group | PROTEOMASS Scientific Society",
journal = "4th International Caparica Christmas Conference on Sample Treatement, 30th November - 3rd December 2020, Caparica, Portugal (on-line), 2020.",
title = "Significant molecular and complex association descriptors in QSRR modelling of Green Liquid Chromatography using β-cyclodextrin mobile phases",
pages = "94-94",
url = "https://hdl.handle.net/21.15107/rcub_farfar_4705"
}
Protić, A., Maljurić, N., Otašević, B., Malenović, A.,& Zečević, M.. (2020). Significant molecular and complex association descriptors in QSRR modelling of Green Liquid Chromatography using β-cyclodextrin mobile phases. in 4th International Caparica Christmas Conference on Sample Treatement, 30th November - 3rd December 2020, Caparica, Portugal (on-line), 2020.
BIOSCOPE Research Group | PROTEOMASS Scientific Society., 94-94.
https://hdl.handle.net/21.15107/rcub_farfar_4705
Protić A, Maljurić N, Otašević B, Malenović A, Zečević M. Significant molecular and complex association descriptors in QSRR modelling of Green Liquid Chromatography using β-cyclodextrin mobile phases. in 4th International Caparica Christmas Conference on Sample Treatement, 30th November - 3rd December 2020, Caparica, Portugal (on-line), 2020.. 2020;:94-94.
https://hdl.handle.net/21.15107/rcub_farfar_4705 .
Protić, Ana, Maljurić, Nevena, Otašević, Biljana, Malenović, Anđelija, Zečević, Mira, "Significant molecular and complex association descriptors in QSRR modelling of Green Liquid Chromatography using β-cyclodextrin mobile phases" in 4th International Caparica Christmas Conference on Sample Treatement, 30th November - 3rd December 2020, Caparica, Portugal (on-line), 2020. (2020):94-94,
https://hdl.handle.net/21.15107/rcub_farfar_4705 .

A new strategy for development of eco-friendly RP-HPLC method using Corona Charged Aerosol Detector and its application for simultaneous analysis of risperidone and its related impurities

Maljurić, Nevena; Otašević, Biljana; Golubović, Jelena; Krmar, Jovana; Zečević, Mira; Protić, Ana

(Elsevier, 2020)

TY  - JOUR
AU  - Maljurić, Nevena
AU  - Otašević, Biljana
AU  - Golubović, Jelena
AU  - Krmar, Jovana
AU  - Zečević, Mira
AU  - Protić, Ana
PY  - 2020
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/3512
AB  - Green analytical chemistry is primarily directed towards minimization of the amount of waste associated with either the sample preparation or analysis. Among different chromatographic methods, liquid chromatography is considered the least green, allowing for various possibilities for greening. Using green solvents such as ethanol or acetone in RP-HPLC, as an alternative to acetonitrile, is recently attracting an attention. Both ethanol and acetone are characterized with low toxicity, with certain drawbacks limiting their regular use in RP-HPLC. Ethanol has low eluotropic strength and causes high backpressures, while acetone shows high UV cut-off, making it unsuitable for UV/Vis detection. To overcome the existing problems, Corona Charged Aerosol Detector was employed for development of RP-HPLC methods for separation of risperidone and its structurally related impurities with either ethanol or acetone as organic modifier. The methods were optimized by experimental design methodology, while optimal conditions for separation were determined using Derringer's desirability function. Detailed assessment of 3D surface plots of Derringer's desirability function enabled selection of 0.6 mL min−1 flow rate and 20% (v/v) organic modifier content as optimal when using ethanol, while in case of acetone mobile phase flow rate was 0.8 mL min−1 and organic modifier content 17% (v/v). Methods were validated and their eco-friendly character was confirmed through Green Analytical Procedure Index (GAPI). Although both methods are ecologically acceptable, the main drawback is reflected in the fact that no recycling or another waste treatment method exist. In the end, acetone was prioritized over ethanol, due to lower health hazard and decreased amount of generated waste.
PB  - Elsevier
T2  - Microchemical Journal
T1  - A new strategy for development of eco-friendly RP-HPLC method using Corona Charged Aerosol Detector and its application for simultaneous analysis of risperidone and its related impurities
VL  - 153
DO  - 10.1016/j.microc.2019.104394
ER  - 
@article{
author = "Maljurić, Nevena and Otašević, Biljana and Golubović, Jelena and Krmar, Jovana and Zečević, Mira and Protić, Ana",
year = "2020",
abstract = "Green analytical chemistry is primarily directed towards minimization of the amount of waste associated with either the sample preparation or analysis. Among different chromatographic methods, liquid chromatography is considered the least green, allowing for various possibilities for greening. Using green solvents such as ethanol or acetone in RP-HPLC, as an alternative to acetonitrile, is recently attracting an attention. Both ethanol and acetone are characterized with low toxicity, with certain drawbacks limiting their regular use in RP-HPLC. Ethanol has low eluotropic strength and causes high backpressures, while acetone shows high UV cut-off, making it unsuitable for UV/Vis detection. To overcome the existing problems, Corona Charged Aerosol Detector was employed for development of RP-HPLC methods for separation of risperidone and its structurally related impurities with either ethanol or acetone as organic modifier. The methods were optimized by experimental design methodology, while optimal conditions for separation were determined using Derringer's desirability function. Detailed assessment of 3D surface plots of Derringer's desirability function enabled selection of 0.6 mL min−1 flow rate and 20% (v/v) organic modifier content as optimal when using ethanol, while in case of acetone mobile phase flow rate was 0.8 mL min−1 and organic modifier content 17% (v/v). Methods were validated and their eco-friendly character was confirmed through Green Analytical Procedure Index (GAPI). Although both methods are ecologically acceptable, the main drawback is reflected in the fact that no recycling or another waste treatment method exist. In the end, acetone was prioritized over ethanol, due to lower health hazard and decreased amount of generated waste.",
publisher = "Elsevier",
journal = "Microchemical Journal",
title = "A new strategy for development of eco-friendly RP-HPLC method using Corona Charged Aerosol Detector and its application for simultaneous analysis of risperidone and its related impurities",
volume = "153",
doi = "10.1016/j.microc.2019.104394"
}
Maljurić, N., Otašević, B., Golubović, J., Krmar, J., Zečević, M.,& Protić, A.. (2020). A new strategy for development of eco-friendly RP-HPLC method using Corona Charged Aerosol Detector and its application for simultaneous analysis of risperidone and its related impurities. in Microchemical Journal
Elsevier., 153.
https://doi.org/10.1016/j.microc.2019.104394
Maljurić N, Otašević B, Golubović J, Krmar J, Zečević M, Protić A. A new strategy for development of eco-friendly RP-HPLC method using Corona Charged Aerosol Detector and its application for simultaneous analysis of risperidone and its related impurities. in Microchemical Journal. 2020;153.
doi:10.1016/j.microc.2019.104394 .
Maljurić, Nevena, Otašević, Biljana, Golubović, Jelena, Krmar, Jovana, Zečević, Mira, Protić, Ana, "A new strategy for development of eco-friendly RP-HPLC method using Corona Charged Aerosol Detector and its application for simultaneous analysis of risperidone and its related impurities" in Microchemical Journal, 153 (2020),
https://doi.org/10.1016/j.microc.2019.104394 . .
1
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10

Characterization of biomolecules with antibiotic activity from endophytic fungi phomopsis species

Ignjatović, Janko; Maljurić, Nevena; Golubović, Jelena; Ravnikar, Matjaž; Petković, Miloš; Savodnik, Nika; Štrukelj, Borut; Otašević, Biljana

(Slovenian Chemical Society, 2020)

TY  - JOUR
AU  - Ignjatović, Janko
AU  - Maljurić, Nevena
AU  - Golubović, Jelena
AU  - Ravnikar, Matjaž
AU  - Petković, Miloš
AU  - Savodnik, Nika
AU  - Štrukelj, Borut
AU  - Otašević, Biljana
PY  - 2020
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/3661
AB  - Recently, growing interest is devoted to investigation of bioactive secondary metabolites of endophytic fungi. Thus, as an extension to our previous achievements related to antimicrobial potential of endophytic fungi, Phomopsis species isolated from  conifer  needles  was  selected  as  appropriately  promising  natural  source  for  drug  discovery.  Its  dichloromethane  and  ethanol  extracts  considerably  inhibited  growth  of  Escherichia  coli  and  Staphylococcus  aureus.  Moreover,  the  indi-vidual compounds of dichloromethane extract have been separated, collected and purified using semi preparative liquid chromatographic analysis and comprehensively characterized using mass spectrometry (MS) and nuclear magnetic res-onance spectroscopy (NMR). Based on their antimicrobial activity and unique structural characteristics in comparison with  well-established  drugs  from  the  same  therapeutic  category,  two  dominant  compounds  (Z)-(Z)-2-acetoxyprop-1-en-1-yl-3-(3-((E)-3,4-dihydroxypent-1-en-1-yl)oxiran-2-yl)acrylate  (denoted  as  325-3)  and  (Z)-(Z)-2-acetoxyprop-1-en-1-yl  3-(3-((E)-4-hydroxy-3-oxopent-1-en-1-yl)oxiran-2-yl)acrylate  (denoted  as  325-5)  were  recognized  as  valuable  leading structures for future discovery of novel antibiotics.
PB  - Slovenian Chemical Society
T2  - Acta Chimica Slovenica
T1  - Characterization of biomolecules with antibiotic activity from endophytic fungi phomopsis species
VL  - 67
IS  - 2
SP  - 445
EP  - 461
DO  - 10.17344/acsi.2019.5389
ER  - 
@article{
author = "Ignjatović, Janko and Maljurić, Nevena and Golubović, Jelena and Ravnikar, Matjaž and Petković, Miloš and Savodnik, Nika and Štrukelj, Borut and Otašević, Biljana",
year = "2020",
abstract = "Recently, growing interest is devoted to investigation of bioactive secondary metabolites of endophytic fungi. Thus, as an extension to our previous achievements related to antimicrobial potential of endophytic fungi, Phomopsis species isolated from  conifer  needles  was  selected  as  appropriately  promising  natural  source  for  drug  discovery.  Its  dichloromethane  and  ethanol  extracts  considerably  inhibited  growth  of  Escherichia  coli  and  Staphylococcus  aureus.  Moreover,  the  indi-vidual compounds of dichloromethane extract have been separated, collected and purified using semi preparative liquid chromatographic analysis and comprehensively characterized using mass spectrometry (MS) and nuclear magnetic res-onance spectroscopy (NMR). Based on their antimicrobial activity and unique structural characteristics in comparison with  well-established  drugs  from  the  same  therapeutic  category,  two  dominant  compounds  (Z)-(Z)-2-acetoxyprop-1-en-1-yl-3-(3-((E)-3,4-dihydroxypent-1-en-1-yl)oxiran-2-yl)acrylate  (denoted  as  325-3)  and  (Z)-(Z)-2-acetoxyprop-1-en-1-yl  3-(3-((E)-4-hydroxy-3-oxopent-1-en-1-yl)oxiran-2-yl)acrylate  (denoted  as  325-5)  were  recognized  as  valuable  leading structures for future discovery of novel antibiotics.",
publisher = "Slovenian Chemical Society",
journal = "Acta Chimica Slovenica",
title = "Characterization of biomolecules with antibiotic activity from endophytic fungi phomopsis species",
volume = "67",
number = "2",
pages = "445-461",
doi = "10.17344/acsi.2019.5389"
}
Ignjatović, J., Maljurić, N., Golubović, J., Ravnikar, M., Petković, M., Savodnik, N., Štrukelj, B.,& Otašević, B.. (2020). Characterization of biomolecules with antibiotic activity from endophytic fungi phomopsis species. in Acta Chimica Slovenica
Slovenian Chemical Society., 67(2), 445-461.
https://doi.org/10.17344/acsi.2019.5389
Ignjatović J, Maljurić N, Golubović J, Ravnikar M, Petković M, Savodnik N, Štrukelj B, Otašević B. Characterization of biomolecules with antibiotic activity from endophytic fungi phomopsis species. in Acta Chimica Slovenica. 2020;67(2):445-461.
doi:10.17344/acsi.2019.5389 .
Ignjatović, Janko, Maljurić, Nevena, Golubović, Jelena, Ravnikar, Matjaž, Petković, Miloš, Savodnik, Nika, Štrukelj, Borut, Otašević, Biljana, "Characterization of biomolecules with antibiotic activity from endophytic fungi phomopsis species" in Acta Chimica Slovenica, 67, no. 2 (2020):445-461,
https://doi.org/10.17344/acsi.2019.5389 . .
3
2
4

Quantitative structure retention relationship modeling as potential tool in chromatographic determination of stability constants and thermodynamic parameters of β-cyclodextrin complexation process

Maljurić, Nevena; Otašević, Biljana; Malenović, Anđelija; Zečević, Mira; Protić, Ana

(Elsevier B.V., 2020)

TY  - JOUR
AU  - Maljurić, Nevena
AU  - Otašević, Biljana
AU  - Malenović, Anđelija
AU  - Zečević, Mira
AU  - Protić, Ana
PY  - 2020
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/3557
AB  - When cyclodextrins (CDs) are used in chromatography analytes’ retention time is decreased with an in- crease in concentration of CD in the mobile phase. Thus complex stability constants can be determined from the change in retention time of the ligand molecule upon complexation. Since the preceding ap- proach implies extensive and time-consuming HPLC experiments, the goal of this research was to inves- tigate the possibility of using in silico prediction tools instead. Quantitative structure–retention relation- ship (QSRR) model previously developed to explain the retention behavior of risperidone, olanzapine and their structurally related impurities in β-CD modified HPLC system was applied to predict retention fac- tor under different chromatographic conditions within the examined domains. Predicted retention factors were further used for calculation of stability constants and important thermodynamic parameters, namely standard Gibbs free energy, standard molar enthalpy and entropy, contributing to inclusion phenomenon. Unexpected prolonged retention with an increase in β-CD concentration was observed, in contrast to the employed chromatographic theory used for the calculation of the stability constants. Consequently, it led to failure in stability constants and thermodynamic parameters calculation for almost all analytes when acetonitrile content was 20% (v/v) across the investigated pH range. Moreover, ionization of investigated analytes and free stationary phase silanol groups are pH dependent, leading to minimization of secondary interactions if free silanol groups are non-ionized at pH lower than 3. In order to prove accuracy of pre- dicted retention factors, HPLC verification experiments were performed and good agreement between predicted and experimental values was obtained, confirming the applicability of proposed in-silico tool. However, the obtained results opened some novel questions and revealed that chromatographic method is not overall applicable in calculation of stability constants and thermodynamic parameters indicating the complexity of β-CD modified systems.
PB  - Elsevier B.V.
T2  - Journal of Chromatography A
T1  - Quantitative structure retention relationship modeling as potential tool in chromatographic determination of stability constants and thermodynamic parameters of β-cyclodextrin complexation process
VL  - 1619
DO  - 10.1016/j.chroma.2020.460971
ER  - 
@article{
author = "Maljurić, Nevena and Otašević, Biljana and Malenović, Anđelija and Zečević, Mira and Protić, Ana",
year = "2020",
abstract = "When cyclodextrins (CDs) are used in chromatography analytes’ retention time is decreased with an in- crease in concentration of CD in the mobile phase. Thus complex stability constants can be determined from the change in retention time of the ligand molecule upon complexation. Since the preceding ap- proach implies extensive and time-consuming HPLC experiments, the goal of this research was to inves- tigate the possibility of using in silico prediction tools instead. Quantitative structure–retention relation- ship (QSRR) model previously developed to explain the retention behavior of risperidone, olanzapine and their structurally related impurities in β-CD modified HPLC system was applied to predict retention fac- tor under different chromatographic conditions within the examined domains. Predicted retention factors were further used for calculation of stability constants and important thermodynamic parameters, namely standard Gibbs free energy, standard molar enthalpy and entropy, contributing to inclusion phenomenon. Unexpected prolonged retention with an increase in β-CD concentration was observed, in contrast to the employed chromatographic theory used for the calculation of the stability constants. Consequently, it led to failure in stability constants and thermodynamic parameters calculation for almost all analytes when acetonitrile content was 20% (v/v) across the investigated pH range. Moreover, ionization of investigated analytes and free stationary phase silanol groups are pH dependent, leading to minimization of secondary interactions if free silanol groups are non-ionized at pH lower than 3. In order to prove accuracy of pre- dicted retention factors, HPLC verification experiments were performed and good agreement between predicted and experimental values was obtained, confirming the applicability of proposed in-silico tool. However, the obtained results opened some novel questions and revealed that chromatographic method is not overall applicable in calculation of stability constants and thermodynamic parameters indicating the complexity of β-CD modified systems.",
publisher = "Elsevier B.V.",
journal = "Journal of Chromatography A",
title = "Quantitative structure retention relationship modeling as potential tool in chromatographic determination of stability constants and thermodynamic parameters of β-cyclodextrin complexation process",
volume = "1619",
doi = "10.1016/j.chroma.2020.460971"
}
Maljurić, N., Otašević, B., Malenović, A., Zečević, M.,& Protić, A.. (2020). Quantitative structure retention relationship modeling as potential tool in chromatographic determination of stability constants and thermodynamic parameters of β-cyclodextrin complexation process. in Journal of Chromatography A
Elsevier B.V.., 1619.
https://doi.org/10.1016/j.chroma.2020.460971
Maljurić N, Otašević B, Malenović A, Zečević M, Protić A. Quantitative structure retention relationship modeling as potential tool in chromatographic determination of stability constants and thermodynamic parameters of β-cyclodextrin complexation process. in Journal of Chromatography A. 2020;1619.
doi:10.1016/j.chroma.2020.460971 .
Maljurić, Nevena, Otašević, Biljana, Malenović, Anđelija, Zečević, Mira, Protić, Ana, "Quantitative structure retention relationship modeling as potential tool in chromatographic determination of stability constants and thermodynamic parameters of β-cyclodextrin complexation process" in Journal of Chromatography A, 1619 (2020),
https://doi.org/10.1016/j.chroma.2020.460971 . .
7
4
5

Predicting APCI Signal Intensities of Diverse Antipsychotics by Mixed QSPR Models and Comparison of Their Generalization Performances

Krmar, Jovana; Protić, Ana; Đajić, Nevena; Zečević, Mira; Otašević, Biljana

(MSBM, 2019)

TY  - CONF
AU  - Krmar, Jovana
AU  - Protić, Ana
AU  - Đajić, Nevena
AU  - Zečević, Mira
AU  - Otašević, Biljana
PY  - 2019
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/4704
PB  - MSBM
C3  - XIII Mass Spectrometry in Biotechnology and Medicine (MSBM). July 7-13, 2019, Dubrovnik, Croatia.
T1  - Predicting APCI Signal Intensities of Diverse Antipsychotics by Mixed QSPR Models and Comparison of Their Generalization Performances
SP  - 36
EP  - 36
UR  - https://hdl.handle.net/21.15107/rcub_farfar_4704
ER  - 
@conference{
author = "Krmar, Jovana and Protić, Ana and Đajić, Nevena and Zečević, Mira and Otašević, Biljana",
year = "2019",
publisher = "MSBM",
journal = "XIII Mass Spectrometry in Biotechnology and Medicine (MSBM). July 7-13, 2019, Dubrovnik, Croatia.",
title = "Predicting APCI Signal Intensities of Diverse Antipsychotics by Mixed QSPR Models and Comparison of Their Generalization Performances",
pages = "36-36",
url = "https://hdl.handle.net/21.15107/rcub_farfar_4704"
}
Krmar, J., Protić, A., Đajić, N., Zečević, M.,& Otašević, B.. (2019). Predicting APCI Signal Intensities of Diverse Antipsychotics by Mixed QSPR Models and Comparison of Their Generalization Performances. in XIII Mass Spectrometry in Biotechnology and Medicine (MSBM). July 7-13, 2019, Dubrovnik, Croatia.
MSBM., 36-36.
https://hdl.handle.net/21.15107/rcub_farfar_4704
Krmar J, Protić A, Đajić N, Zečević M, Otašević B. Predicting APCI Signal Intensities of Diverse Antipsychotics by Mixed QSPR Models and Comparison of Their Generalization Performances. in XIII Mass Spectrometry in Biotechnology and Medicine (MSBM). July 7-13, 2019, Dubrovnik, Croatia.. 2019;:36-36.
https://hdl.handle.net/21.15107/rcub_farfar_4704 .
Krmar, Jovana, Protić, Ana, Đajić, Nevena, Zečević, Mira, Otašević, Biljana, "Predicting APCI Signal Intensities of Diverse Antipsychotics by Mixed QSPR Models and Comparison of Their Generalization Performances" in XIII Mass Spectrometry in Biotechnology and Medicine (MSBM). July 7-13, 2019, Dubrovnik, Croatia. (2019):36-36,
https://hdl.handle.net/21.15107/rcub_farfar_4704 .