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dc.creatorPawellek, Ruben
dc.creatorKrmar, Jovana
dc.creatorLeistner, Adrian
dc.creatorĐajić, Nevena
dc.creatorOtašević, Biljana
dc.creatorProtić, Ana
dc.creatorHolzgrabe, Ulrike
dc.date.accessioned2021-08-04T08:53:21Z
dc.date.available2021-08-04T08:53:21Z
dc.date.issued2021
dc.identifier.issn1758-2946
dc.identifier.urihttps://farfar.pharmacy.bg.ac.rs/handle/123456789/3926
dc.description.abstractThe charged aerosol detector (CAD) is the latest representative of aerosol-based detectors that generate a response independent of the analytes’ chemical structure. This study was aimed at accurately predicting the CAD response of homologous fatty acids under varying experimental conditions. Fatty acids from C12 to C18 were used as model substances due to semivolatile characterics that caused non-uniform CAD behaviour. Considering both experimental conditions and molecular descriptors, a mixed quantitative structure–property relationship (QSPR) modeling was performed using Gradient Boosted Trees (GBT ). The ensemble of 10 decisions trees (learning rate set at 0.55, the maximal depth set at 5, and the sample rate set at 1.0) was able to explain approximately 99% (Q2: 0.987, RMSE: 0.051) of the observed variance in CAD responses. Validation using an external test compound confirmed the high predic- tive ability of the model established (R2: 0.990, RMSEP: 0.050). With respect to the intrinsic attribute selection strategy, GBT used almost all independent variables during model building. Finally, it attributed the highest importance to the power function value, the flow rate of the mobile phase, evaporation temperature, the content of the organic solvent in the mobile phase and the molecular descriptors such as molecular weight (MW ), Radial Distribution Func- tion—080/weighted by mass (RDF080m) and average coefficient of the last eigenvector from distance/detour matrix (Ve2_D/Dt). The identification of the factors most relevant to the CAD responsiveness has contributed to a better understanding of the underlying mechanisms of signal generation. An increased CAD response that was obtained for acetone as organic modifier demonstrated its potential to replace the more expensive and environmentally harmful acetonitrile.
dc.publisherBioMed Central Ltd
dc.relationDAAD PPP Program for Project-Related Personal Exchange with Serbia
dc.relationFund of the University of Wuerzburg
dc.relationinfo:eu-repo/grantAgreement/MESTD/inst-2020/200161/RS//
dc.rightsopenAccess
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.sourceJournal of Cheminformatics
dc.subjectFatty acids
dc.subjectCharged aerosol detector (CAD)
dc.subjectGradient boosted trees (GBT)
dc.subjectHigh-performance liquid chromatography (HPLC)
dc.subjectQuantitative structure–property relationship modeling (QSPR)
dc.titleCharged aerosol detector response modeling for fatty acids based on experimental settings and molecular features: a machine learning approach
dc.typearticle
dc.rights.licenseBY
dcterms.abstractЂајић, Невена; Паwеллек, Рубен; Крмар, Јована; Оташевић, Биљана; Протић, Aна; Холзграбе, Улрике; Леистнер, Aдриан;
dc.citation.volume13
dc.citation.issue1
dc.citation.rankaM21
dc.identifier.wos000673977300001
dc.identifier.doi10.1186/s13321-021-00532-0
dc.identifier.scopus2-s2.0-85110487489
dc.identifier.fulltexthttps://farfar.pharmacy.bg.ac.rs/bitstream/id/9062/Charged_aerosol_detector_pub_2021.pdf
dc.type.versionpublishedVersion


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