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Long non‐coding RNA regulation of epigenetics in vascular cells

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2021
Long_Non-Coding_RNA_pub_2021.pdf (1.537Mb)
Authors
Garratt, Hester
Ashburn, Robert
Sopić, Miron
Nogara, Antonella
Caporali, Andrea
Mitić, Tijana
Article (Published version)
Metadata
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Abstract
The vascular endothelium comprises the interface between the circulation and the vessel wall and, as such, is under the dynamic regulation of vascular signalling, nutrients, and hypoxia. Understanding the molecular drivers behind endothelial cell (EC) and vascular smooth muscle cell (VSMC) function and dysfunction remains a pivotal task for further clinical progress in tackling vascular disease. A newly emerging era in vascular biology with landmark deep sequencing approaches has provided us with the means to profile diverse layers of transcriptional regulation at a single cell, chromatin, and epigenetic level. This review describes the roles of major vascular long non-coding RNA (lncRNAs) in the epigenetic regulation of EC and VSMC function and discusses the recent progress in their discovery, detection, and functional characterisation. We summarise new findings regarding lncRNA-mediated epigenetic mechanisms—often regulated by hypoxia—within the vascular endothelium and smooth muscle... to control vascular homeostasis in health and disease. Furthermore, we outline novel molecular techniques being used in the field to delineate the lncRNA subcellular localisation and interaction with proteins to unravel their biological roles in the epigenetic regulation of vascular genes.

Keywords:
Chromatin / Epigenetics / LncRNA / PRC2 / RNA‐protein / Vascular biology
Source:
Non-coding RNA, 2021, 7, 4
Publisher:
  • MDPI

DOI: 10.3390/ncrna7040062

ISSN: 2311-553X

WoS: 000735588900001

Scopus: 2-s2.0-85116048376
[ Google Scholar ]
2
2
URI
https://farfar.pharmacy.bg.ac.rs/handle/123456789/3978
Collections
  • Radovi istraživača / Researchers’ publications
Institution/Community
Pharmacy
TY  - JOUR
AU  - Garratt, Hester
AU  - Ashburn, Robert
AU  - Sopić, Miron
AU  - Nogara, Antonella
AU  - Caporali, Andrea
AU  - Mitić, Tijana
PY  - 2021
UR  - https://farfar.pharmacy.bg.ac.rs/handle/123456789/3978
AB  - The vascular endothelium comprises the interface between the circulation and the vessel wall and, as such, is under the dynamic regulation of vascular signalling, nutrients, and hypoxia. Understanding the molecular drivers behind endothelial cell (EC) and vascular smooth muscle cell (VSMC) function and dysfunction remains a pivotal task for further clinical progress in tackling vascular disease. A newly emerging era in vascular biology with landmark deep sequencing approaches has provided us with the means to profile diverse layers of transcriptional regulation at a single cell, chromatin, and epigenetic level. This review describes the roles of major vascular long non-coding RNA (lncRNAs) in the epigenetic regulation of EC and VSMC function and discusses the recent progress in their discovery, detection, and functional characterisation. We summarise new findings regarding lncRNA-mediated epigenetic mechanisms—often regulated by hypoxia—within the vascular endothelium and smooth muscle to control vascular homeostasis in health and disease. Furthermore, we outline novel molecular techniques being used in the field to delineate the lncRNA subcellular localisation and interaction with proteins to unravel their biological roles in the epigenetic regulation of vascular genes.
PB  - MDPI
T2  - Non-coding RNA
T1  - Long non‐coding RNA regulation of epigenetics in vascular cells
VL  - 7
IS  - 4
DO  - 10.3390/ncrna7040062
ER  - 
@article{
author = "Garratt, Hester and Ashburn, Robert and Sopić, Miron and Nogara, Antonella and Caporali, Andrea and Mitić, Tijana",
year = "2021",
abstract = "The vascular endothelium comprises the interface between the circulation and the vessel wall and, as such, is under the dynamic regulation of vascular signalling, nutrients, and hypoxia. Understanding the molecular drivers behind endothelial cell (EC) and vascular smooth muscle cell (VSMC) function and dysfunction remains a pivotal task for further clinical progress in tackling vascular disease. A newly emerging era in vascular biology with landmark deep sequencing approaches has provided us with the means to profile diverse layers of transcriptional regulation at a single cell, chromatin, and epigenetic level. This review describes the roles of major vascular long non-coding RNA (lncRNAs) in the epigenetic regulation of EC and VSMC function and discusses the recent progress in their discovery, detection, and functional characterisation. We summarise new findings regarding lncRNA-mediated epigenetic mechanisms—often regulated by hypoxia—within the vascular endothelium and smooth muscle to control vascular homeostasis in health and disease. Furthermore, we outline novel molecular techniques being used in the field to delineate the lncRNA subcellular localisation and interaction with proteins to unravel their biological roles in the epigenetic regulation of vascular genes.",
publisher = "MDPI",
journal = "Non-coding RNA",
title = "Long non‐coding RNA regulation of epigenetics in vascular cells",
volume = "7",
number = "4",
doi = "10.3390/ncrna7040062"
}
Garratt, H., Ashburn, R., Sopić, M., Nogara, A., Caporali, A.,& Mitić, T.. (2021). Long non‐coding RNA regulation of epigenetics in vascular cells. in Non-coding RNA
MDPI., 7(4).
https://doi.org/10.3390/ncrna7040062
Garratt H, Ashburn R, Sopić M, Nogara A, Caporali A, Mitić T. Long non‐coding RNA regulation of epigenetics in vascular cells. in Non-coding RNA. 2021;7(4).
doi:10.3390/ncrna7040062 .
Garratt, Hester, Ashburn, Robert, Sopić, Miron, Nogara, Antonella, Caporali, Andrea, Mitić, Tijana, "Long non‐coding RNA regulation of epigenetics in vascular cells" in Non-coding RNA, 7, no. 4 (2021),
https://doi.org/10.3390/ncrna7040062 . .

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